RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LBX1P52954 281 aa16.93■□□□□ 0.3
HMGN1-211ENST00000471260 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
HMGN1-211ENST00000471260 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
HMGN1-211ENST00000471260 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
HMGN1-211ENST00000471260 APOBEC3FQ8IUX4 373 aaKnown RBP16.92■□□□□ 0.3
HMGN1-211ENST00000471260 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
HMGN1-211ENST00000471260 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
HMGN1-211ENST00000471260 ZBED3Q96IU2 234 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-211ENST00000471260 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
HMGN1-211ENST00000471260 FAM205AQ6ZU69 1335 aa16.92■□□□□ 0.3
HMGN1-211ENST00000471260 NF2P35240 595 aa16.91■□□□□ 0.3
HMGN1-211ENST00000471260 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-211ENST00000471260 DLGAP5Q15398 846 aa16.91■□□□□ 0.3
HMGN1-211ENST00000471260 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
HMGN1-211ENST00000471260 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-211ENST00000471260 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-211ENST00000471260 PDE8BO95263 885 aa16.9■□□□□ 0.3
HMGN1-211ENST00000471260 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
HMGN1-211ENST00000471260 METTL24Q5JXM2 366 aa16.9■□□□□ 0.3
HMGN1-211ENST00000471260 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-211ENST00000471260 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
HMGN1-211ENST00000471260 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
HMGN1-211ENST00000471260 MYO1BO43795 1136 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 SLC10A3P09131 477 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-211ENST00000471260 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 VGLL2Q8N8G2 317 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.29
HMGN1-211ENST00000471260 COL1A1P02452 1464 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-211ENST00000471260 GYG1P46976 350 aa16.88■□□□□ 0.29
HMGN1-211ENST00000471260 FBXO33Q7Z6M2 555 aa16.88■□□□□ 0.29
HMGN1-211ENST00000471260 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
HMGN1-211ENST00000471260 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
HMGN1-211ENST00000471260 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
HMGN1-211ENST00000471260 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-211ENST00000471260 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
HMGN1-211ENST00000471260 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
HMGN1-211ENST00000471260 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 EYA2O00167 538 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
HMGN1-211ENST00000471260 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
HMGN1-211ENST00000471260 PUM3Q15397 648 aaKnown RBP16.86■□□□□ 0.29
HMGN1-211ENST00000471260 TBC1D22AQ8WUA7 517 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 SAGE1Q9NXZ1 904 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
HMGN1-211ENST00000471260 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-211ENST00000471260 FGFR2P21802 821 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-211ENST00000471260 INTS3Q68E01 1043 aaKnown RBP16.85■□□□□ 0.29
HMGN1-211ENST00000471260 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 ZIC5Q96T25 663 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
HMGN1-211ENST00000471260 SCAF8Q9UPN6 1271 aaKnown RBP16.85■□□□□ 0.29
HMGN1-211ENST00000471260 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
HMGN1-211ENST00000471260 FRAT2O75474 233 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-211ENST00000471260 CIAO1O76071 339 aa16.84■□□□□ 0.29
HMGN1-211ENST00000471260 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
HMGN1-211ENST00000471260 LPIN2Q92539 896 aa16.84■□□□□ 0.29
HMGN1-211ENST00000471260 PRMT6Q96LA8 375 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-211ENST00000471260 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
HMGN1-211ENST00000471260 JAG2Q9Y219 1238 aa16.84■□□□□ 0.29
HMGN1-211ENST00000471260 UNCXA6NJT0 531 aa16.83■□□□□ 0.28
HMGN1-211ENST00000471260 GNAI3P08754 354 aa16.83■□□□□ 0.28
HMGN1-211ENST00000471260 RBM5P52756 815 aaKnown RBP eCLIP16.83■□□□□ 0.28
HMGN1-211ENST00000471260 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
HMGN1-211ENST00000471260 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-211ENST00000471260 CSRNP1Q96S65 589 aa16.83■□□□□ 0.28
HMGN1-211ENST00000471260 MRIQ9BWK5 157 aa16.83■□□□□ 0.28
HMGN1-211ENST00000471260 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
HMGN1-211ENST00000471260 ECM29Q5VYK3 1845 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 SLC5A1P13866 664 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 ATG9AQ7Z3C6 839 aa16.82■□□□□ 0.28
HMGN1-211ENST00000471260 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
HMGN1-211ENST00000471260 IL15P40933 162 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-211ENST00000471260 BCAMP50895 628 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 MEIS3Q99687 375 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 CEP126Q9P2H0 1117 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 PCDHAC2Q9Y5I4 1007 aa16.81■□□□□ 0.28
HMGN1-211ENST00000471260 MAST3O60307 1309 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 ZBTB22O15209 634 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-211ENST00000471260 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
HMGN1-211ENST00000471260 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
HMGN1-211ENST00000471260 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 AKAP11Q9UKA4 1901 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms