RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 ECE1P42892 770 aa23.58■■□□□ 1.37
COMMD1-204ENST00000445644 METTL24Q5JXM2 366 aa23.58■■□□□ 1.37
COMMD1-204ENST00000445644 TDRD7Q8NHU6 1098 aaKnown RBP23.58■■□□□ 1.37
COMMD1-204ENST00000445644 GBA2Q9HCG7 927 aaPredicted RBP23.58■■□□□ 1.37
COMMD1-204ENST00000445644 PCDHAC2Q9Y5I4 1007 aa23.58■■□□□ 1.37
COMMD1-204ENST00000445644 PDE8BO95263 885 aa23.57■■□□□ 1.36
COMMD1-204ENST00000445644 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
COMMD1-204ENST00000445644 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
COMMD1-204ENST00000445644 LRRFIP2Q9Y608 721 aaKnown RBP23.57■■□□□ 1.36
COMMD1-204ENST00000445644 FAM205AQ6ZU69 1335 aa23.57■■□□□ 1.36
COMMD1-204ENST00000445644 TRIM27P14373 513 aa23.56■■□□□ 1.36
COMMD1-204ENST00000445644 HUNKP57058 714 aa23.56■■□□□ 1.36
COMMD1-204ENST00000445644 FKBP1AP62942 108 aaKnown RBP23.56■■□□□ 1.36
COMMD1-204ENST00000445644 FGFR2P21802 821 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 HIBADHP31937 336 aaKnown RBP23.55■■□□□ 1.36
COMMD1-204ENST00000445644 MMP14P50281 582 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 FBXO33Q7Z6M2 555 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 HDAC9Q9UKV0 1011 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 AOX1Q06278 1338 aa23.55■■□□□ 1.36
COMMD1-204ENST00000445644 F8W031 263 aaPredicted RBP23.54■■□□□ 1.36
COMMD1-204ENST00000445644 EYA2O00167 538 aa23.54■■□□□ 1.36
COMMD1-204ENST00000445644 PRAMEF18Q5VWM3 479 aa23.54■■□□□ 1.36
COMMD1-204ENST00000445644 ZIC5Q96T25 663 aa23.54■■□□□ 1.36
COMMD1-204ENST00000445644 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
COMMD1-204ENST00000445644 MAP2K1Q02750 393 aaPredicted RBP23.53■■□□□ 1.36
COMMD1-204ENST00000445644 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
COMMD1-204ENST00000445644 C2orf69Q8N8R5 385 aa23.53■■□□□ 1.36
COMMD1-204ENST00000445644 MTMR14Q8NCE2 650 aa23.53■■□□□ 1.36
COMMD1-204ENST00000445644 MAP2K2P36507 400 aa23.52■■□□□ 1.36
COMMD1-204ENST00000445644 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-204ENST00000445644 IQSEC3Q9UPP2 1182 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-204ENST00000445644 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
COMMD1-204ENST00000445644 GRIK5Q16478 980 aa23.51■■□□□ 1.35
COMMD1-204ENST00000445644 RGMBQ6NW40 437 aa23.51■■□□□ 1.35
COMMD1-204ENST00000445644 MOB2Q70IA6 237 aa23.51■■□□□ 1.35
COMMD1-204ENST00000445644 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
COMMD1-204ENST00000445644 SIL1Q9H173 461 aa23.51■■□□□ 1.35
COMMD1-204ENST00000445644 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
COMMD1-204ENST00000445644 HSPA8P11142 646 aaKnown RBP23.5■■□□□ 1.35
COMMD1-204ENST00000445644 CTCFP49711 727 aaPredicted RBP23.5■■□□□ 1.35
COMMD1-204ENST00000445644 BCAMP50895 628 aa23.5■■□□□ 1.35
COMMD1-204ENST00000445644 PUM3Q15397 648 aaKnown RBP23.5■■□□□ 1.35
COMMD1-204ENST00000445644 DLGAP5Q15398 846 aa23.5■■□□□ 1.35
COMMD1-204ENST00000445644 CFAP100Q494V2 611 aa23.5■■□□□ 1.35
COMMD1-204ENST00000445644 MFSD14BQ5SR56 506 aa23.5■■□□□ 1.35
COMMD1-204ENST00000445644 COL1A1P02452 1464 aaPredicted RBP23.49■■□□□ 1.35
COMMD1-204ENST00000445644 CLUAP1Q96AJ1 413 aa23.49■■□□□ 1.35
COMMD1-204ENST00000445644 PRMT6Q96LA8 375 aaPredicted RBP23.49■■□□□ 1.35
COMMD1-204ENST00000445644 SSC5DA1L4H1 1573 aa23.48■■□□□ 1.35
COMMD1-204ENST00000445644 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
COMMD1-204ENST00000445644 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
COMMD1-204ENST00000445644 CIAO1O76071 339 aa23.48■■□□□ 1.35
COMMD1-204ENST00000445644 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
COMMD1-204ENST00000445644 LBX1P52954 281 aa23.48■■□□□ 1.35
COMMD1-204ENST00000445644 APOBEC3FQ8IUX4 373 aaKnown RBP23.48■■□□□ 1.35
COMMD1-204ENST00000445644 CAVIN4Q5BKX8 364 aa23.47■■□□□ 1.35
COMMD1-204ENST00000445644 PRDM10Q9NQV6 1147 aa23.47■■□□□ 1.35
COMMD1-204ENST00000445644 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
COMMD1-204ENST00000445644 GNAI3P08754 354 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 SLC10A3P09131 477 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 ZNF157P51786 506 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-204ENST00000445644 CHAF1AQ13111 956 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-204ENST00000445644 NOGQ13253 232 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 VPS37DQ86XT2 251 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 TMEM57Q8N5G2 664 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 COPRSQ9NQ92 184 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
COMMD1-204ENST00000445644 TTF2Q9UNY4 1162 aaKnown RBP23.46■■□□□ 1.35
COMMD1-204ENST00000445644 CLRN2A0PK11 232 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 IFIT1P09914 478 aaKnown RBP23.45■■□□□ 1.34
COMMD1-204ENST00000445644 FKBP1BP68106 108 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 MTX1Q13505 466 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 ZKSCAN2Q63HK3 967 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 LPIN2Q92539 896 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 TSKSQ9UJT2 592 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 LAMB1P07942 1786 aa23.45■■□□□ 1.34
COMMD1-204ENST00000445644 SLC5A1P13866 664 aa23.44■■□□□ 1.34
COMMD1-204ENST00000445644 RASAL3Q86YV0 1011 aa23.44■■□□□ 1.34
COMMD1-204ENST00000445644 TNS4Q8IZW8 715 aa23.44■■□□□ 1.34
COMMD1-204ENST00000445644 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
COMMD1-204ENST00000445644 UBE2Q2LH0YL09 131 aa23.43■■□□□ 1.34
COMMD1-204ENST00000445644 IL15P40933 162 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-204ENST00000445644 CCDC102AQ96A19 550 aa23.43■■□□□ 1.34
COMMD1-204ENST00000445644 DEFB129Q9H1M3 183 aa23.43■■□□□ 1.34
COMMD1-204ENST00000445644 SERPINA10Q9UK55 444 aa23.43■■□□□ 1.34
COMMD1-204ENST00000445644 FZD1Q9UP38 647 aa23.43■■□□□ 1.34
COMMD1-204ENST00000445644 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-204ENST00000445644 SRGAP3O43295 1099 aa23.42■■□□□ 1.34
COMMD1-204ENST00000445644 RBM5P52756 815 aaKnown RBP eCLIP23.42■■□□□ 1.34
COMMD1-204ENST00000445644 ATP2B3Q16720 1220 aa23.42■■□□□ 1.34
COMMD1-204ENST00000445644 RLBP1P12271 317 aa23.41■■□□□ 1.34
COMMD1-204ENST00000445644 CRKP46108 304 aa23.41■■□□□ 1.34
COMMD1-204ENST00000445644 KIF23Q02241 960 aaPredicted RBP23.41■■□□□ 1.34
COMMD1-204ENST00000445644 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
COMMD1-204ENST00000445644 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
COMMD1-204ENST00000445644 FRAT2O75474 233 aaPredicted RBP23.4■■□□□ 1.34
COMMD1-204ENST00000445644 SPDYE2Q495Y8 402 aa23.4■■□□□ 1.34
COMMD1-204ENST00000445644 TBC1D22AQ8WUA7 517 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms