RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 USP21Q9UK80 565 aa9.5□□□□□ -0.89
HMGB2-202ENST00000438704 ASAP1Q9ULH1 1129 aa9.5□□□□□ -0.89
HMGB2-202ENST00000438704 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
HMGB2-202ENST00000438704 IGKV5-2P06315 115 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 NEXNQ0ZGT2 675 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
HMGB2-202ENST00000438704 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
HMGB2-202ENST00000438704 IRF7Q92985 503 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 ZFP42Q96MM3 310 aa9.49□□□□□ -0.89
HMGB2-202ENST00000438704 RREB1Q92766 1687 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 NUP188Q5SRE5 1749 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 GRM8O00222 908 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 CYP19A1P11511 503 aaPredicted RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 TIMP2P16035 220 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 RGS3P49796 1198 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 MRPL14Q6P1L8 145 aaKnown RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 RIC3Q7Z5B4 369 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 SLC4A9Q96Q91 983 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
HMGB2-202ENST00000438704 TJP1Q07157 1748 aa9.48□□□□□ -0.89
HMGB2-202ENST00000438704 H3BM21 787 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
HMGB2-202ENST00000438704 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 NBPF7P0C2Y1 421 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-202ENST00000438704 SCARF1Q14162 830 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 GCKRQ14397 625 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 BMP2KLQ5H9B9 411 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 KLF16Q9BXK1 252 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-202ENST00000438704 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
HMGB2-202ENST00000438704 PNMA6EA0A0J9YXQ4 647 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 A1BGP04217 495 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 MYL6BP14649 208 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
HMGB2-202ENST00000438704 CASP7P55210 303 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
HMGB2-202ENST00000438704 RABL6Q3YEC7 729 aaPredicted RBP9.46□□□□□ -0.9
HMGB2-202ENST00000438704 HSP90AB4PQ58FF6 505 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 ANKRD45Q5TZF3 282 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 CCDC191Q8NCU4 936 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 C9orf78Q9NZ63 289 aaPredicted RBP9.46□□□□□ -0.9
HMGB2-202ENST00000438704 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
HMGB2-202ENST00000438704 AFF2P51816 1311 aa9.46□□□□□ -0.9
HMGB2-202ENST00000438704 KAT6BQ8WYB5 2073 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 ERVV-1B6SEH8 477 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 H7C1W4 665 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 AIMP1Q12904 312 aaKnown RBP9.45□□□□□ -0.9
HMGB2-202ENST00000438704 NR5A1Q13285 461 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 PPP1R42Q7Z4L9 355 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
HMGB2-202ENST00000438704 KAZALD1Q96I82 304 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 ISCA1Q9BUE6 129 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 LNPKQ9C0E8 428 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 SALL3Q9BXA9 1300 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
HMGB2-202ENST00000438704 LOC102724428A0A0B4J2F2 783 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
HMGB2-202ENST00000438704 SIK1P57059 783 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
HMGB2-202ENST00000438704 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 MEX3CQ5U5Q3 659 aaKnown RBP9.44□□□□□ -0.9
HMGB2-202ENST00000438704 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 ARMC2Q8NEN0 867 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 MYD88Q99836 296 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 AOX1Q06278 1338 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 MAP3K15Q6ZN16 1313 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
HMGB2-202ENST00000438704 SRGAP3O43295 1099 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 EIF5BO60841 1220 aaKnown RBP9.43□□□□□ -0.9
HMGB2-202ENST00000438704 GMPRP36959 345 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 PLA2G12BQ9BX93 195 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 LRRCC1Q9C099 1032 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
HMGB2-202ENST00000438704 STAP2Q9UGK3 403 aa9.43□□□□□ -0.9
HMGB2-202ENST00000438704 CNTNAP4Q9C0A0 1308 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 USP42Q9H9J4 1324 aaKnown RBP9.42□□□□□ -0.9
HMGB2-202ENST00000438704 PDE4DQ08499 809 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
HMGB2-202ENST00000438704 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 ERC1Q8IUD2 1116 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 PURBQ96QR8 312 aaKnown RBP9.42□□□□□ -0.9
HMGB2-202ENST00000438704 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 CCDC87Q9NVE4 849 aa9.42□□□□□ -0.9
HMGB2-202ENST00000438704 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms