RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DLGAP5Q15398 846 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 EPHA10Q5JZY3 1008 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 ARMC9Q7Z3E5 817 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 PPP2R3BQ9Y5P8 575 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 MYO1BO43795 1136 aa18.83■□□□□ 0.6
MSH5-208ENST00000429846 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
MSH5-208ENST00000429846 SLC4A10Q6U841 1118 aa18.83■□□□□ 0.6
MSH5-208ENST00000429846 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
MSH5-208ENST00000429846 LAMB1P07942 1786 aa18.83■□□□□ 0.6
MSH5-208ENST00000429846 SREBF2Q12772 1141 aa18.81■□□□□ 0.6
MSH5-208ENST00000429846 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
MSH5-208ENST00000429846 CTU1Q7Z7A3 348 aaKnown RBP18.81■□□□□ 0.6
MSH5-208ENST00000429846 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
MSH5-208ENST00000429846 DEFB129Q9H1M3 183 aa18.81■□□□□ 0.6
MSH5-208ENST00000429846 UTYO14607 1347 aa18.8■□□□□ 0.6
MSH5-208ENST00000429846 SPDYE2BA6NHP3 402 aa18.8■□□□□ 0.6
MSH5-208ENST00000429846 SPDYE6P0CI01 402 aa18.8■□□□□ 0.6
MSH5-208ENST00000429846 TM4SF4P48230 202 aa18.8■□□□□ 0.6
MSH5-208ENST00000429846 NOM1Q5C9Z4 860 aaKnown RBP18.8■□□□□ 0.6
MSH5-208ENST00000429846 FAM205AQ6ZU69 1335 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 UNCXA6NJT0 531 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 PLIN1O60240 522 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 MAP3K11Q16584 847 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
MSH5-208ENST00000429846 ANGEL1Q9UNK9 670 aaKnown RBP18.79■□□□□ 0.6
MSH5-208ENST00000429846 PTPRCP08575 1304 aa18.78■□□□□ 0.6
MSH5-208ENST00000429846 MROH5Q6ZUA9 1318 aa18.78■□□□□ 0.6
MSH5-208ENST00000429846 SSC5DA1L4H1 1573 aa18.78■□□□□ 0.6
MSH5-208ENST00000429846 NBPF7P0C2Y1 421 aaPredicted RBP18.78■□□□□ 0.6
MSH5-208ENST00000429846 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
MSH5-208ENST00000429846 RABL6Q3YEC7 729 aaPredicted RBP18.78■□□□□ 0.6
MSH5-208ENST00000429846 TDRD7Q8NHU6 1098 aaKnown RBP18.78■□□□□ 0.6
MSH5-208ENST00000429846 CFHR5Q9BXR6 569 aa18.78■□□□□ 0.6
MSH5-208ENST00000429846 F8W031 263 aaPredicted RBP18.77■□□□□ 0.6
MSH5-208ENST00000429846 PPP1R12BO60237 982 aaPredicted RBP18.77■□□□□ 0.6
MSH5-208ENST00000429846 PRKG1Q13976 671 aa18.77■□□□□ 0.6
MSH5-208ENST00000429846 PKN2Q16513 984 aaKnown RBP18.77■□□□□ 0.6
MSH5-208ENST00000429846 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
MSH5-208ENST00000429846 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
MSH5-208ENST00000429846 E9PSI1 815 aa18.76■□□□□ 0.59
MSH5-208ENST00000429846 ZBTB48P10074 688 aaPredicted RBP18.76■□□□□ 0.59
MSH5-208ENST00000429846 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
MSH5-208ENST00000429846 TNFAIP1Q13829 316 aa18.76■□□□□ 0.59
MSH5-208ENST00000429846 SUPT20HL1Q3ZLR7 823 aa18.76■□□□□ 0.59
MSH5-208ENST00000429846 SPRYD7Q5W111 196 aa18.76■□□□□ 0.59
MSH5-208ENST00000429846 SERPINA10Q9UK55 444 aa18.76■□□□□ 0.59
MSH5-208ENST00000429846 TBC1D8O95759 1140 aa18.75■□□□□ 0.59
MSH5-208ENST00000429846 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
MSH5-208ENST00000429846 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
MSH5-208ENST00000429846 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
MSH5-208ENST00000429846 ZNF296Q8WUU4 475 aaPredicted RBP18.75■□□□□ 0.59
MSH5-208ENST00000429846 FAM84BQ96KN1 310 aaPredicted RBP18.75■□□□□ 0.59
MSH5-208ENST00000429846 PRMT6Q96LA8 375 aaPredicted RBP18.75■□□□□ 0.59
MSH5-208ENST00000429846 BICC1Q9H694 974 aaKnown RBP18.75■□□□□ 0.59
MSH5-208ENST00000429846 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
MSH5-208ENST00000429846 JAG2Q9Y219 1238 aa18.75■□□□□ 0.59
MSH5-208ENST00000429846 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
MSH5-208ENST00000429846 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
MSH5-208ENST00000429846 MANSC4A6NHS7 340 aaPredicted RBP18.74■□□□□ 0.59
MSH5-208ENST00000429846 GYG1P46976 350 aa18.74■□□□□ 0.59
MSH5-208ENST00000429846 INHBEP58166 350 aa18.74■□□□□ 0.59
MSH5-208ENST00000429846 MKRN3Q13064 507 aaKnown RBP18.74■□□□□ 0.59
MSH5-208ENST00000429846 PUS3Q9BZE2 481 aaKnown RBP18.74■□□□□ 0.59
MSH5-208ENST00000429846 PCDHAC2Q9Y5I4 1007 aa18.74■□□□□ 0.59
MSH5-208ENST00000429846 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
MSH5-208ENST00000429846 GPR25O00155 361 aa18.73■□□□□ 0.59
MSH5-208ENST00000429846 IREB2P48200 963 aaKnown RBP18.73■□□□□ 0.59
MSH5-208ENST00000429846 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
MSH5-208ENST00000429846 SLC10A4Q96EP9 437 aa18.73■□□□□ 0.59
MSH5-208ENST00000429846 TTF2Q9UNY4 1162 aaKnown RBP18.73■□□□□ 0.59
MSH5-208ENST00000429846 SPDYE2Q495Y8 402 aa18.72■□□□□ 0.59
MSH5-208ENST00000429846 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
MSH5-208ENST00000429846 VPS37DQ86XT2 251 aa18.72■□□□□ 0.59
MSH5-208ENST00000429846 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
MSH5-208ENST00000429846 RASA3Q14644 834 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 WNK4Q96J92 1243 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 FZD1Q9UP38 647 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
MSH5-208ENST00000429846 MYH13Q9UKX3 1938 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 FKTNO75072 461 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 PDE8BO95263 885 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
MSH5-208ENST00000429846 FBXO33Q7Z6M2 555 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 ZNF70Q9UC06 446 aaPredicted RBP18.7■□□□□ 0.58
MSH5-208ENST00000429846 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 AOX1Q06278 1338 aa18.7■□□□□ 0.58
MSH5-208ENST00000429846 TNNI2P48788 182 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 HDLBPQ00341 1268 aaKnown RBP18.69■□□□□ 0.58
MSH5-208ENST00000429846 SLFN5Q08AF3 891 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 LRRC24Q50LG9 513 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 IFNL1Q8IU54 200 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms