RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OSBP2Q969R2 916 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 TBC1D2Q9BYX2 928 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 ATP6V0A2Q9Y487 856 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 MYO5AQ9Y4I1 1855 aaKnown RBP14.96□□□□□ -0.01
CHMP3-204ENST00000409727 ATP2B4P23634 1241 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 SLC16A10Q8TF71 515 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 POLLQ9UGP5 575 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 DENND2AQ9ULE3 1009 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 ZNF532Q9HCE3 1301 aa14.96□□□□□ -0.01
CHMP3-204ENST00000409727 PDE6AP16499 860 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 ADD2P35612 726 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 VPS53Q5VIR6 699 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 ZSCAN25Q6NSZ9 544 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 TMC4Q7Z404 712 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 MAGEB6Q8N7X4 407 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 TBC1D16Q8TBP0 767 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 PUS7LQ9H0K6 701 aaKnown RBP14.95□□□□□ -0.02
CHMP3-204ENST00000409727 TMX4Q9H1E5 349 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-204ENST00000409727 IRS2Q9Y4H2 1338 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
CHMP3-204ENST00000409727 CD2BP2O95400 341 aaKnown RBP14.95□□□□□ -0.02
CHMP3-204ENST00000409727 RABEP1Q15276 862 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 APPBP2Q92624 585 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 MAP4K1Q92918 833 aa14.95□□□□□ -0.02
CHMP3-204ENST00000409727 PSDA5PKW4 1024 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-204ENST00000409727 STYK1Q6J9G0 422 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 ZNF804AQ7Z570 1209 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 HSCBQ8IWL3 235 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 PODXL2Q9NZ53 605 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 RAI14Q9P0K7 980 aa14.94□□□□□ -0.02
CHMP3-204ENST00000409727 MYH7P12883 1935 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 RIMBP2O15034 1052 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 TICAM2Q86XR7 235 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 MPNDQ8N594 471 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 SPRYD3Q8NCJ5 442 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 ANAPC15P60006 121 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 NECTIN1Q15223 517 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 CREB3L3Q68CJ9 461 aa14.93□□□□□ -0.02
CHMP3-204ENST00000409727 DPP8Q6V1X1 898 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-204ENST00000409727 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
CHMP3-204ENST00000409727 LRRC37AA6NMS7 1700 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 TCRBV5S4A2TA0A5A2 114 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 SEMA3EO15041 775 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 GPAA1O43292 621 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 NEK4P51957 841 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 UBE3CQ15386 1083 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 CNKSR1Q969H4 720 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 C10orf71Q711Q0 1435 aa14.92□□□□□ -0.02
CHMP3-204ENST00000409727 A0A0G2JLW4 131 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 SLC27A2O14975 620 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 HSPD1P10809 573 aaKnown RBP14.91□□□□□ -0.02
CHMP3-204ENST00000409727 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-204ENST00000409727 MYH13Q9UKX3 1938 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-204ENST00000409727 CYP7A1P22680 504 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 POLD1P28340 1107 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 ADCK5Q3MIX3 580 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 MTFR1LQ9H019 292 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 CD209Q9NNX6 404 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
CHMP3-204ENST00000409727 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-204ENST00000409727 SLX4Q8IY92 1834 aa14.9□□□□□ -0.02
CHMP3-204ENST00000409727 DPEP1P16444 411 aa14.9□□□□□ -0.02
CHMP3-204ENST00000409727 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
CHMP3-204ENST00000409727 C15orf52Q6ZUT6 534 aaKnown RBP14.9□□□□□ -0.02
CHMP3-204ENST00000409727 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
CHMP3-204ENST00000409727 TDRD7Q8NHU6 1098 aaKnown RBP14.9□□□□□ -0.02
CHMP3-204ENST00000409727 SNX21Q969T3 373 aa14.9□□□□□ -0.02
CHMP3-204ENST00000409727 LTBP1Q14766 1721 aa14.9□□□□□ -0.02
CHMP3-204ENST00000409727 ST18O60284 1047 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 MBD4O95243 580 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 CPA1P15085 419 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
CHMP3-204ENST00000409727 PRDX5P30044 214 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 ERICH6Q7L0X2 663 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 JAKMIP1Q96N16 626 aaKnown RBP14.89□□□□□ -0.03
CHMP3-204ENST00000409727 DSCC1Q9BVC3 393 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 ZC3H12CQ9C0D7 883 aaKnown RBP14.89□□□□□ -0.03
CHMP3-204ENST00000409727 C21orf2O43822 256 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 APPP05067 770 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 DOK7Q18PE1 504 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 TTLL5Q6EMB2 1281 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 ARMT1Q9H993 441 aa14.89□□□□□ -0.03
CHMP3-204ENST00000409727 DUOX1Q9NRD9 1551 aa14.88□□□□□ -0.03
CHMP3-204ENST00000409727 FOXP2O15409 715 aa14.88□□□□□ -0.03
CHMP3-204ENST00000409727 MECOMQ03112 1051 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms