RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SSRP1Q08945 709 aaKnown RBP14.57□□□□□ -0.08
CDX2-201ENST00000381020 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
CDX2-201ENST00000381020 TFCP2L1Q9NZI6 479 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 PRDM1O75626 825 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 HSP90AA2PQ14568 343 aaPredicted RBP14.56□□□□□ -0.08
CDX2-201ENST00000381020 WTAPQ15007 396 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 RNF41Q9H4P4 317 aaPredicted RBP14.56□□□□□ -0.08
CDX2-201ENST00000381020 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 PDILTQ8N807 584 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 PDE8BO95263 885 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 CEP57L1Q8IYX8 460 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 OSBP2Q969R2 916 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 TTLL11Q8NHH1 800 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 ZDHHC9Q9Y397 364 aa14.56□□□□□ -0.08
CDX2-201ENST00000381020 CTDSPL2Q05D32 466 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 SPATA5Q8NB90 893 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 GYG1P46976 350 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 RRAGDQ9NQL2 400 aaPredicted RBP14.55□□□□□ -0.08
CDX2-201ENST00000381020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.55□□□□□ -0.08
CDX2-201ENST00000381020 MAST3O60307 1309 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 TSPY2A6NKD2 308 aa14.55□□□□□ -0.08
CDX2-201ENST00000381020 IL6STP40189 918 aaPredicted RBP14.55□□□□□ -0.08
CDX2-201ENST00000381020 RBM5P52756 815 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDX2-201ENST00000381020 MEGF6O75095 1541 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 FOXO4P98177 505 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 ANO6Q4KMQ2 910 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 DSCC1Q9BVC3 393 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 DNAJC25Q9H1X3 360 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 C3P01024 1663 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 MAGEB6P1A0A0J9YX57 407 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
CDX2-201ENST00000381020 PHKBQ93100 1093 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 GTF3C6Q969F1 213 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 GPHNQ9NQX3 736 aaPredicted RBP14.54□□□□□ -0.08
CDX2-201ENST00000381020 KCNQ2O43526 872 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 ZMYM1Q5SVZ6 1142 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 HOMER1Q86YM7 354 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 WASF1Q92558 559 aa14.54□□□□□ -0.08
CDX2-201ENST00000381020 PUS7LQ9H0K6 701 aaKnown RBP14.54□□□□□ -0.08
CDX2-201ENST00000381020 M0R2C6 588 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 PDE6AP16499 860 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 USP21Q9UK80 565 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 SERPINC1P01008 464 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 ZNF445P59923 1031 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 RBM10P98175 930 aaKnown RBP14.53□□□□□ -0.08
CDX2-201ENST00000381020 TTC12Q9H892 705 aaPredicted RBP14.53□□□□□ -0.08
CDX2-201ENST00000381020 STX8Q9UNK0 236 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
CDX2-201ENST00000381020 SUSD4Q5VX71 490 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 CATIPQ7Z7H3 387 aa14.53□□□□□ -0.08
CDX2-201ENST00000381020 F8W031 263 aaPredicted RBP14.52□□□□□ -0.08
CDX2-201ENST00000381020 RTN1Q16799 776 aa14.52□□□□□ -0.08
CDX2-201ENST00000381020 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.08
CDX2-201ENST00000381020 ERCC4Q92889 916 aaPredicted RBP14.52□□□□□ -0.08
CDX2-201ENST00000381020 KIF13AQ9H1H9 1805 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 MST1RQ04912 1400 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 A0A1B0GVL5 298 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 TTC6Q86TZ1 520 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 LEO1Q8WVC0 666 aaPredicted RBP14.52□□□□□ -0.09
CDX2-201ENST00000381020 ESR2Q92731 530 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 KRT23Q9C075 422 aa14.52□□□□□ -0.09
CDX2-201ENST00000381020 CIAO1O76071 339 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ADD1P35611 737 aaKnown RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 TYRO3Q06418 890 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 SCRN1Q12765 414 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 LUZP1Q86V48 1076 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ANGEL1Q9UNK9 670 aaKnown RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 CYP19A1P11511 503 aaPredicted RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 SCARF1Q14162 830 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ATG9AQ7Z3C6 839 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ZNF444Q8N0Y2 327 aaPredicted RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 TPM3P06753 285 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 RABL6Q3YEC7 729 aaPredicted RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 USPL1Q5W0Q7 1092 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 GPR108Q9NPR9 543 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ANO10Q9NW15 660 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 PPP1R1BQ9UD71 204 aaPredicted RBP14.51□□□□□ -0.09
CDX2-201ENST00000381020 WWC3Q9ULE0 1092 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 MROH5Q6ZUA9 1318 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 SALL3Q9BXA9 1300 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 LIG1P18858 919 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 ISCA1Q9BUE6 129 aa14.51□□□□□ -0.09
CDX2-201ENST00000381020 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
CDX2-201ENST00000381020 CHRNDQ07001 517 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 TRAPPC3LQ5T215 181 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 IFIT1BQ5T764 474 aaKnown RBP14.5□□□□□ -0.09
CDX2-201ENST00000381020 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 CMTR1Q8N1G2 835 aaKnown RBP14.5□□□□□ -0.09
CDX2-201ENST00000381020 CRNKL1Q9BZJ0 848 aaKnown RBP14.5□□□□□ -0.09
CDX2-201ENST00000381020 VAT1LQ9HCJ6 419 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 SOS2Q07890 1332 aaPredicted RBP14.5□□□□□ -0.09
CDX2-201ENST00000381020 hCG_1642624A0A1W2PR95 340 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 HSP90AA4PQ58FG1 418 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms