RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 THOC1Q96FV9 657 aaKnown RBP13.25□□□□□ -0.29
CNOT4-203ENST00000361528 RSRC1Q96IZ7 334 aaKnown RBP13.25□□□□□ -0.29
CNOT4-203ENST00000361528 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 WDR24Q96S15 920 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 PNKPQ96T60 521 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 TM6SF1Q9BZW5 370 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 IFNKQ9P0W0 207 aa13.25□□□□□ -0.29
CNOT4-203ENST00000361528 GLI2P10070 1586 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 EME2A4GXA9 379 aaPredicted RBP13.24□□□□□ -0.29
CNOT4-203ENST00000361528 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 C1QTNF12Q5T7M4 302 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 IGSF22Q8N9C0 903 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 DDX20Q9UHI6 824 aaKnown RBP13.24□□□□□ -0.29
CNOT4-203ENST00000361528 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 CFAP45Q9UL16 551 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
CNOT4-203ENST00000361528 AP1G2O75843 785 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 AMPHP49418 695 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 RAB27AP51159 221 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 CCDC40Q4G0X9 1142 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 MKL1Q969V6 931 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
CNOT4-203ENST00000361528 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
CNOT4-203ENST00000361528 MYO1BO43795 1136 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
CNOT4-203ENST00000361528 IFFO1Q0D2I5 559 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 PDIA5Q14554 519 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 NAA25Q14CX7 972 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 TRIM73Q86UV7 250 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 KDRP35968 1356 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 ZEB2O60315 1214 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 PSMD2Q13200 908 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 SLMAPQ14BN4 828 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 OR8K1Q8NGG5 319 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
CNOT4-203ENST00000361528 MAST1Q9Y2H9 1570 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 ADCY9O60503 1353 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-203ENST00000361528 VSNL1P62760 191 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
CNOT4-203ENST00000361528 TBC1D2BQ9UPU7 963 aa13.22□□□□□ -0.29
CNOT4-203ENST00000361528 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
CNOT4-203ENST00000361528 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 STX10O60499 249 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 LARGE1O95461 756 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 IMPDH2P12268 514 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 GBP2P32456 591 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-203ENST00000361528 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 PARD3BQ8TEW8 1205 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-203ENST00000361528 ACTR5Q9H9F9 607 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-203ENST00000361528 AHCYL1O43865 530 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 RTN3O95197 1032 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-203ENST00000361528 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 PARP9Q8IXQ6 854 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 SPDL1Q96EA4 605 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
CNOT4-203ENST00000361528 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.3
CNOT4-203ENST00000361528 GOLGA6CA6NDK9 693 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 FESP07332 822 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
CNOT4-203ENST00000361528 GOLGA6DP0CG33 693 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
CNOT4-203ENST00000361528 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 GOLGA6AQ9NYA3 693 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 GRIN2DO15399 1336 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 H7C1W4 665 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 IKBKBO14920 756 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 TMEM139Q8IV31 216 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
CNOT4-203ENST00000361528 TFIP11Q9UBB9 837 aaKnown RBP13.2□□□□□ -0.3
CNOT4-203ENST00000361528 LIN7AO14910 233 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CDKL5O76039 1030 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 STIM1Q13586 685 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CEP57Q86XR8 500 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 SLC40A1Q9NP59 571 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms