RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
RIPK4-202ENST00000352483 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
RIPK4-202ENST00000352483 NCOA7Q8NI08 942 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 ZSWIM6Q9HCJ5 1215 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 TNS3Q68CZ2 1445 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 ERBB4Q15303 1308 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 TOM1O60784 492 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
RIPK4-202ENST00000352483 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 SLC12A7Q9Y666 1083 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 H7C1W4 665 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 MCM5P33992 734 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 USPL1Q5W0Q7 1092 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
RIPK4-202ENST00000352483 SCRN1Q12765 414 aa15.21■□□□□ 0.02
RIPK4-202ENST00000352483 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 DHX8Q14562 1220 aaKnown RBP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 ATG9AQ7Z3C6 839 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 ANO6Q4KMQ2 910 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 ARHGAP23Q9P227 1491 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 PDE8AO60658 829 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 MCAMP43121 646 aa15.2■□□□□ 0.02
RIPK4-202ENST00000352483 SART3Q15020 963 aaKnown RBP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 SAFBQ15424 915 aaKnown RBP eCLIP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
RIPK4-202ENST00000352483 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
RIPK4-202ENST00000352483 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
RIPK4-202ENST00000352483 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 AK7Q96M32 723 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 CDK11BP21127 795 aaKnown RBP15.19■□□□□ 0.02
RIPK4-202ENST00000352483 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
RIPK4-202ENST00000352483 AATFQ9NY61 560 aaKnown RBP eCLIP15.19■□□□□ 0.02
RIPK4-202ENST00000352483 USP5P45974 858 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 ZSCAN25Q6NSZ9 544 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 NOL10Q9BSC4 688 aaKnown RBP15.18■□□□□ 0.02
RIPK4-202ENST00000352483 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 PIH1D3Q9NQM4 214 aaKnown RBP15.18■□□□□ 0.02
RIPK4-202ENST00000352483 STX8Q9UNK0 236 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 MTX1Q13505 466 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 ERFEQ4G0M1 354 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 KCNJ14Q9UNX9 436 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 AOX1Q06278 1338 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 IGSF3O75054 1194 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 NLRP3Q96P20 1036 aa15.18■□□□□ 0.02
RIPK4-202ENST00000352483 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
RIPK4-202ENST00000352483 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
RIPK4-202ENST00000352483 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 ZNF165P49910 485 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 MSL1Q68DK7 614 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 USP21Q9UK80 565 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 SLIT1O75093 1534 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 FSD2A1L4K1 749 aa15.17■□□□□ 0.02
RIPK4-202ENST00000352483 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
RIPK4-202ENST00000352483 SCAND2PQ9GZW5 306 aaPredicted RBP15.17■□□□□ 0.02
RIPK4-202ENST00000352483 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 NR1I2O75469 434 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 CBX1P83916 185 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 FAM47AQ5JRC9 791 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 SPATA5Q8NB90 893 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 ZNF396Q96N95 335 aaPredicted RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 CDC5LQ99459 802 aaKnown RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 PDE8BO95263 885 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 PDE6AP16499 860 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 TPM4P67936 248 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 APPBP2Q92624 585 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 ZBTB43O43298 467 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
RIPK4-202ENST00000352483 PICALMQ13492 652 aa15.16■□□□□ 0.02
RIPK4-202ENST00000352483 MST1RQ04912 1400 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 MARCH6O60337 910 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 CUL4AQ13619 759 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 TPM2P07951 284 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 CHRNDQ07001 517 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 MKNK2Q9HBH9 465 aa15.15■□□□□ 0.02
RIPK4-202ENST00000352483 RTCBQ9Y3I0 505 aaKnown RBP15.15■□□□□ 0.02
RIPK4-202ENST00000352483 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms