RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 G3V3G9 751 aa16.65■□□□□ 0.26
HERPUD1-202ENST00000344114 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
HERPUD1-202ENST00000344114 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
HERPUD1-202ENST00000344114 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
HERPUD1-202ENST00000344114 USP17L8P0C7I0 530 aa16.64■□□□□ 0.26
HERPUD1-202ENST00000344114 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.26
HERPUD1-202ENST00000344114 USP44Q9H0E7 712 aa16.64■□□□□ 0.26
HERPUD1-202ENST00000344114 HDAC5Q9UQL6 1122 aa16.64■□□□□ 0.26
HERPUD1-202ENST00000344114 SPEF2Q9C093 1822 aa16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 MOB2Q70IA6 237 aa16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-202ENST00000344114 XDHP47989 1333 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 PDE8AO60658 829 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 TM4SF4P48230 202 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 LNPKQ9C0E8 428 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 HDAC9Q9UKV0 1011 aa16.63■□□□□ 0.25
HERPUD1-202ENST00000344114 LAMB1P07942 1786 aa16.62■□□□□ 0.25
HERPUD1-202ENST00000344114 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
HERPUD1-202ENST00000344114 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
HERPUD1-202ENST00000344114 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
HERPUD1-202ENST00000344114 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-202ENST00000344114 UBE2Q2LH0YL09 131 aa16.61■□□□□ 0.25
HERPUD1-202ENST00000344114 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
HERPUD1-202ENST00000344114 MYD88Q99836 296 aa16.61■□□□□ 0.25
HERPUD1-202ENST00000344114 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
HERPUD1-202ENST00000344114 SCAF8Q9UPN6 1271 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-202ENST00000344114 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 GPR25O00155 361 aa16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 UTYO14607 1347 aa16.6■□□□□ 0.25
HERPUD1-202ENST00000344114 ANP32AP39687 249 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-202ENST00000344114 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
HERPUD1-202ENST00000344114 FBXO46Q6PJ61 603 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-202ENST00000344114 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-202ENST00000344114 WNT10BO00744 389 aa16.58■□□□□ 0.24
HERPUD1-202ENST00000344114 DACT2Q5SW24 774 aa16.58■□□□□ 0.24
HERPUD1-202ENST00000344114 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-202ENST00000344114 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-202ENST00000344114 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 SREBF2Q12772 1141 aa16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
HERPUD1-202ENST00000344114 ECM29Q5VYK3 1845 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 GRM8O00222 908 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 NF2P35240 595 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 MMP14P50281 582 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 CTSWP56202 376 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 MTX1Q13505 466 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 POLA2Q14181 598 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 RBBP6Q7Z6E9 1792 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-202ENST00000344114 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 FKTNO75072 461 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
HERPUD1-202ENST00000344114 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-202ENST00000344114 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
HERPUD1-202ENST00000344114 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
HERPUD1-202ENST00000344114 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
HERPUD1-202ENST00000344114 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-202ENST00000344114 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-202ENST00000344114 GCKRQ14397 625 aa16.53■□□□□ 0.24
HERPUD1-202ENST00000344114 LDLRAD1Q5T700 205 aa16.53■□□□□ 0.24
HERPUD1-202ENST00000344114 ARMC9Q7Z3E5 817 aa16.53■□□□□ 0.24
HERPUD1-202ENST00000344114 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
HERPUD1-202ENST00000344114 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 SASH1O94885 1247 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 GREM2Q9H772 168 aa16.52■□□□□ 0.24
HERPUD1-202ENST00000344114 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 ALDH1A1P00352 501 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 309.5 ms