RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 USP6P35125 1406 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 BAG3O95817 575 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZNF75DP51815 510 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 MYL5Q02045 173 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 PYM1Q9BRP8 204 aaKnown RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 UTP14AQ9BVJ6 771 aaKnown RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZFYVE27Q5T4F4 411 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 TERF1P54274 439 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 STX17P56962 302 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ARHGEF25Q86VW2 580 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 UBE2Q2Q8WVN8 375 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 NGLY1Q96IV0 654 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 TAF5LO75529 589 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 GNAT2P19087 354 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 DDX17Q92841 729 aaKnown RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZHX1Q9UKY1 873 aaPredicted RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 KDRP35968 1356 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 PNPLA6Q8IY17 1366 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 SH3TC1Q8TE82 1336 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 PHKG2P15735 406 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZAP70P43403 619 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 E7EWF7 191 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 ZNF500O60304 480 aaPredicted RBP8.23□□□□□ -1.09
VCAN-202ENST00000342785 TMEM266Q2M3C6 531 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 KRT222Q8N1A0 295 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 TRIM47Q96LD4 638 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 USP28Q96RU2 1077 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 DSCC1Q9BVC3 393 aa8.23□□□□□ -1.09
VCAN-202ENST00000342785 TRPM1Q7Z4N2 1603 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 TUBB4AP04350 444 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 ARHGAP31Q2M1Z3 1444 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 ZNF76P36508 570 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 DDB1Q16531 1140 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 SPTY2D1Q68D10 685 aaPredicted RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 DIS3L2Q8IYB7 885 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 TAF4BQ92750 862 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 MPHOSPH10O00566 681 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 SYCP1Q15431 976 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 TDRD12Q587J7 1177 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 RILPL1Q5EBL4 403 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 TTLL7Q6ZT98 887 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 KRT40Q6A162 431 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 TSPYL1Q9H0U9 437 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 USO1O60763 962 aaKnown RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 CENPHQ9H3R5 247 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 CDK12Q9NYV4 1490 aaPredicted RBP8.22□□□□□ -1.09
VCAN-202ENST00000342785 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 ODF2Q5BJF6 829 aa8.22□□□□□ -1.09
VCAN-202ENST00000342785 ELP1O95163 1332 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 IQGAP3Q86VI3 1631 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.09
VCAN-202ENST00000342785 DNA2P51530 1060 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 AMPD3Q01432 767 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 CALML4Q96GE6 196 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 KCNH3Q9ULD8 1083 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 EFCAB6Q5THR3 1501 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.09
VCAN-202ENST00000342785 GNAQP50148 359 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 TCIRG1Q13488 830 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 MYRIPQ8NFW9 859 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 TSC1Q92574 1164 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 CTAGE1Q96RT6 745 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 MYL10Q9BUA6 226 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 MYO6Q9UM54 1294 aa8.21□□□□□ -1.09
VCAN-202ENST00000342785 GOLGA6L10A6NI86 522 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 AKR1B10O60218 316 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 ZNF202O95125 648 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 PAFAH1B1P43034 410 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 PRDM1O75626 825 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 CYP21A2P08686 494 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 HSPD1P10809 573 aaKnown RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 RPGRQ92834 1020 aaKnown RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 CABP5Q9NP86 173 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 RMND1Q9NWS8 449 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 PLEKHG1Q9ULL1 1385 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 POLA2Q14181 598 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 TSG101Q99816 390 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 CCDC94Q9BW85 323 aaPredicted RBP8.21□□□□□ -1.1
VCAN-202ENST00000342785 ABCC3O15438 1527 aa8.21□□□□□ -1.1
VCAN-202ENST00000342785 PHKBQ93100 1093 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1315.8 ms