RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 CAP1Q01518 475 aa11.23□□□□□ -0.61
TFF1-201ENST00000291527 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
TFF1-201ENST00000291527 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
TFF1-201ENST00000291527 MYH16Q9H6N6 1097 aa11.23□□□□□ -0.61
TFF1-201ENST00000291527 SAGE1Q9NXZ1 904 aa11.23□□□□□ -0.61
TFF1-201ENST00000291527 GRM8O00222 908 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 IL1R1P14778 569 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 GJA5P36382 358 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 GYG1P46976 350 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 KCNJ4P48050 445 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 LDLRAD1Q5T700 205 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 NBPF12Q5TAG4 269 aaPredicted RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 C15orf52Q6ZUT6 534 aaKnown RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 ZNF296Q8WUU4 475 aaPredicted RBP11.22□□□□□ -0.61
TFF1-201ENST00000291527 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
TFF1-201ENST00000291527 ANP32CO43423 234 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 TM4SF4P48230 202 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 LRRC24Q50LG9 513 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 OGFOD1Q8N543 542 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 DEFB129Q9H1M3 183 aa11.21□□□□□ -0.61
TFF1-201ENST00000291527 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.61
TFF1-201ENST00000291527 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
TFF1-201ENST00000291527 FKBP1BP68106 108 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 DLGAP5Q15398 846 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
TFF1-201ENST00000291527 ANKRD44Q8N8A2 993 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
TFF1-201ENST00000291527 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 RIPOR2Q9Y4F9 1068 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 LAMB1P07942 1786 aa11.2□□□□□ -0.62
TFF1-201ENST00000291527 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 USP2O75604 605 aaPredicted RBP11.19□□□□□ -0.62
TFF1-201ENST00000291527 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
TFF1-201ENST00000291527 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
TFF1-201ENST00000291527 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
TFF1-201ENST00000291527 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
TFF1-201ENST00000291527 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
TFF1-201ENST00000291527 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 GPR25O00155 361 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
TFF1-201ENST00000291527 CCDC57Q2TAC2 916 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 APOBEC3FQ8IUX4 373 aaKnown RBP11.18□□□□□ -0.62
TFF1-201ENST00000291527 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
TFF1-201ENST00000291527 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 C9orf78Q9NZ63 289 aaPredicted RBP11.18□□□□□ -0.62
TFF1-201ENST00000291527 HDAC9Q9UKV0 1011 aa11.18□□□□□ -0.62
TFF1-201ENST00000291527 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 CACNB3P54284 484 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 RASA3Q14644 834 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 ARMC9Q7Z3E5 817 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 WNK4Q96J92 1243 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 PTPN18Q99952 460 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
TFF1-201ENST00000291527 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
TFF1-201ENST00000291527 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
TFF1-201ENST00000291527 UTYO14607 1347 aa11.16□□□□□ -0.62
TFF1-201ENST00000291527 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
TFF1-201ENST00000291527 MAP3K11Q16584 847 aa11.16□□□□□ -0.62
TFF1-201ENST00000291527 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
TFF1-201ENST00000291527 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
TFF1-201ENST00000291527 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
TFF1-201ENST00000291527 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
TFF1-201ENST00000291527 NF2P35240 595 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 BCAMP50895 628 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 FKBP1AP62942 108 aaKnown RBP11.15□□□□□ -0.62
TFF1-201ENST00000291527 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
TFF1-201ENST00000291527 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
TFF1-201ENST00000291527 MFSD14BQ5SR56 506 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 USP44Q9H0E7 712 aa11.15□□□□□ -0.62
TFF1-201ENST00000291527 TTF2Q9UNY4 1162 aaKnown RBP11.15□□□□□ -0.62
TFF1-201ENST00000291527 CRKP46108 304 aa11.14□□□□□ -0.63
TFF1-201ENST00000291527 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
TFF1-201ENST00000291527 UBE4AQ14139 1066 aa11.14□□□□□ -0.63
TFF1-201ENST00000291527 SPDYE2Q495Y8 402 aa11.14□□□□□ -0.63
TFF1-201ENST00000291527 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms