RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543		V9GYS6	101 aa		11.47	□□□□□ -0.57
NRXN1-233	ENST00000630543	HGFAC	Q04756	655 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	CEACAM21	Q3KPI0	293 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	C1orf185	Q5T7R7	199 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	DCAF12L2	Q5VW00	463 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	TMEM268	Q5VZI3	342 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	TMEM231	Q9H6L2	316 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	NDUFB7	P17568	137 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	FPR2	P25090	351 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	RBM11	P57052	281 aa	Known RBP	11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	ZDHHC22	Q8N966	263 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	RELL2	Q8NC24	303 aa	Predicted RBP	11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	OR8U1	Q8NH10	309 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	SCGB1C1	Q8TD33	95 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543	FAM117A	Q9C073	453 aa		11.46	□□□□□ -0.57
NRXN1-233	ENST00000630543		B8ZZF3	427 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	NUBP1	P53384	320 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	TMEM50B	P56557	158 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	OR11L1	Q8NGX0	322 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	LRRC29	Q8WV35	223 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	H1FX	Q92522	213 aa	Known RBP	11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	PLK3	Q9H4B4	646 aa		11.46	□□□□□ -0.58
NRXN1-233	ENST00000630543	CPN1	P15169	458 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	S100P	P25815	95 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543		Q5BKY6	102 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	LGI3	Q8N145	548 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	DEFB108A	A8MXU0	73 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	PSMB6	P28072	239 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	ARL3	P36405	182 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	CEBPD	P49716	269 aa	Predicted RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	ASPHD2	Q6ICH7	369 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543		Q6ZT83	130 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	VPS13A	Q96RL7	3174 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	NCOR2	Q9Y618	2525 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	CDRT15L2	A8MXV6	281 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	SRSF10	O75494	262 aa	Known RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	CRYGS	P22914	178 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	GLRX5	Q86SX6	157 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	TPRX1	Q8N7U7	411 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	OR10V1	Q8NGI7	309 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	BCL2L2	Q92843	193 aa	Predicted RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	DOCK10	Q96BY6	2186 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	MRPS24	Q96EL2	167 aa	Known RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	SDSL	Q96GA7	329 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	MAGT1	Q9H0U3	335 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	TAAR3P	Q9P1P4	343 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	IL36RN	Q9UBH0	155 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	COL4A2	P08572	1712 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	KCNAB3	O43448	404 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	RPS23	P62266	143 aa	Known RBP	11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	CLEC18B	Q6UXF7	455 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	RNF138	Q8WVD3	245 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	OR5B12	Q96R08	314 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	GPHA2	Q96T91	129 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	SPIN2A	Q99865	258 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	SPIN2B	Q9BPZ2	258 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	DLL3	Q9NYJ7	618 aa		11.45	□□□□□ -0.58
NRXN1-233	ENST00000630543	KLF3	P57682	345 aa	Predicted RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	ACSF3	Q4G176	576 aa	Predicted RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	HOGA1	Q86XE5	327 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	ZNF680	Q8NEM1	530 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	IGKV3D-15	A0A087WSY6	115 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	IGHV3-43	A0A0B4J1X8	118 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	GLA	P06280	429 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	IGHV3-43D	P0DP04	118 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	EXOSC2	Q13868	293 aa	Known RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	IGSF11	Q5DX21	431 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	FAM74A1	Q5RGS3	127 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	LPCAT3	Q6P1A2	487 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	TMEM200A	Q86VY9	491 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	TMEM217	Q8N7C4	229 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	ABCA4	P78363	2273 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	DHRS7C	A6NNS2	312 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543		J3QT63	122 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	AQP7	O14520	342 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	ALX3	O95076	343 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	SMIM21	Q3B7S5	101 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	ZNF709	Q8N972	641 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	RBPMS	Q93062	196 aa	Known RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	RNF166	Q96A37	237 aa	Predicted RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543		Q96M66	194 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	SPRY4	Q9C004	299 aa		11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	HEATR1	Q9H583	2144 aa	Known RBP	11.44	□□□□□ -0.58
NRXN1-233	ENST00000630543	FCGR3A	P08637	254 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	AADAC	P22760	399 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	FAM27E3	Q08E93	113 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	PEA15	Q15121	130 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	KLF14	Q8TD94	323 aa	Predicted RBP	11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	CACNA1B	Q00975	2339 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	MED6	O75586	246 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	OR5AC1	P0C628	307 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	ANOS1	P23352	680 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	ECI1	P42126	302 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	SPACA3	Q8IXA5	215 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	SUMF2	Q8NBJ7	301 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	MED30	Q96HR3	178 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	POM121L2	Q96KW2	1035 aa		11.43	□□□□□ -0.58
NRXN1-233	ENST00000630543	C1QTNF5	Q9BXJ0	243 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms