RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 LPAR5Q9H1C0 372 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 OR51I2Q9H344 312 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 ELOVL3Q9HB03 270 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 MKKSQ9NPJ1 570 aaPredicted RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 CLN8Q9UBY8 286 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TAC3Q9UHF0 121 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 PRSS50Q9UI38 385 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 ADAM29Q9UKF5 820 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 RNF115Q9Y4L5 304 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 ENTPD2Q9Y5L3 495 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 INSL5Q9Y5Q6 135 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 ZNF780BQ9Y6R6 833 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SDCBPO00560 298 aaPredicted RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 CTSBP07858 339 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 PSG1P11464 419 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 SFTPDP35247 375 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 CLDN18P56856 261 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 RPS20P60866 119 aaKnown RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 DUSP2Q05923 314 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 HYAL1Q12794 435 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 ARFRP1Q13795 201 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 PRSS8Q16651 343 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR4A47Q6IF82 309 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 Q6ZWC4 215 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 CDC20BQ86Y33 519 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR52R1Q8NGF1 315 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR2V1Q8NHB1 315 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 SAMD10Q9BYL1 202 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 WDR76Q9H967 626 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 A0A1B0GWA3 101 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 CEACAM18A8MTB9 384 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 TOX4O94842 621 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 TIMP1P01033 207 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 TCN2P20062 427 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 VIPR2P41587 438 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 ZFP36L1Q07352 338 aaKnown RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 BSXQ3C1V8 233 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 WBP2NLQ6ICG8 309 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 KCNIP4Q6PIL6 250 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 PET117Q6UWS5 81 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 D2HGDHQ8N465 521 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 ZNF689Q96CS4 500 aaPredicted RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 STARD4Q96DR4 205 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 MANBALQ9NQG1 85 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 PLAGL1Q9UM63 463 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 A0A1W2PRS3 328 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 A0A1W2PRU2 124 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 WIPF3A6NGB9 483 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 IGLON5A6NGN9 336 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 NUPR1O60356 82 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OMGP23515 440 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 CD1BP29016 333 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 CDKN1AP38936 164 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 RAB38P57729 211 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 IL13RA2Q14627 380 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 PRSS57Q6UWY2 283 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 COX15Q7KZN9 410 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 NIT1Q86X76 327 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 KLHDC1Q8N7A1 406 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 OR13G1Q8NGZ3 307 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 GNPNAT1Q96EK6 184 aaPredicted RBP6.92□□□□□ -1.3
VPS11-209ENST00000622309 SDF2Q99470 211 aa6.92□□□□□ -1.3
VPS11-209ENST00000622309 ARPC3O15145 178 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 YPEL1O60688 119 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 HLA-DQA2P01906 255 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 STATHP02808 62 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CDKN2AP42771 156 aaKnown RBP6.91□□□□□ -1.3
VPS11-209ENST00000622309 GABRA2P47869 451 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 EMP2P54851 167 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 KRTDAPP60985 99 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CSNK2A1P68400 391 aaPredicted RBP6.91□□□□□ -1.3
VPS11-209ENST00000622309 C1QL3Q5VWW1 255 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 MFSD12Q6NUT3 480 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CMTM8Q8IZV2 173 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CSNK2A3Q8NEV1 391 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 ASB5Q8WWX0 329 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 PPP1R14AQ96A00 147 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 YPEL2Q96QA6 119 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 ST6GALNAC5Q9BVH7 336 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CALHM2Q9HA72 323 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 ZNF581Q9P0T4 197 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 MRPS28Q9Y2Q9 187 aaKnown RBP6.91□□□□□ -1.3
VPS11-209ENST00000622309 A0A0A6YYD5 115 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 C4orf47A7E2U8 309 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 HSPB2A8KAH6 182 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CEBPZOSA8MTT3 80 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 LILRA1O75019 489 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 NGFRP08138 427 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 BCL2P10415 239 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CD70P32970 193 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 EWSR1Q01844 656 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS11-209ENST00000622309 TLE3Q04726 772 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 HSPB2Q16082 182 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms