RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 DTD1Q8TEA8 209 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 SLC25A43Q8WUT9 341 aaPredicted RBP8.37□□□□□ -1.07
TPM1-233ENST00000610733 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 OR5B12Q96R08 314 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 TOLLIPQ9H0E2 274 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 ERRFI1Q9UJM3 462 aaPredicted RBP8.37□□□□□ -1.07
TPM1-233ENST00000610733 FZR1Q9UM11 496 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 DEFB108AA8MXU0 73 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 SPINK4O60575 86 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 CYTIPO60759 359 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
TPM1-233ENST00000610733 MMP7P09237 267 aaPredicted RBP8.37□□□□□ -1.07
TPM1-233ENST00000610733 SELEP16581 610 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 NPBWR2P48146 333 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 DYNLT3P51808 116 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 DMWDQ09019 674 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 ZNF345Q14585 488 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 WDR25Q64LD2 544 aaPredicted RBP8.37□□□□□ -1.07
TPM1-233ENST00000610733 CYB5R2Q6BCY4 276 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 CYB561D1Q8N8Q1 229 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 CNEP1R1Q8N9A8 125 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 TMEM204Q9BSN7 226 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 NMES1Q9C002 83 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 CCL28Q9NRJ3 127 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 WBP1LQ9NX94 342 aa8.37□□□□□ -1.07
TPM1-233ENST00000610733 LILRA5A6NI73 299 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ZNF732B4DXR9 585 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CHST1O43916 411 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CD74P04233 296 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 FOLR3P41439 243 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ZNF816Q0VGE8 651 aaPredicted RBP8.36□□□□□ -1.07
TPM1-233ENST00000610733 LYSMD4Q5XG99 296 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 GAPTQ8N292 157 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SLC25A45Q8N413 288 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CPT1CQ8TCG5 803 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 NINJ1Q92982 152 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 TVP23CQ96ET8 276 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 MEGF10Q96KG7 1140 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CCNL2Q96S94 520 aaPredicted RBP8.36□□□□□ -1.07
TPM1-233ENST00000610733 SPIN2AQ99865 258 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SPIN2BQ9BPZ2 258 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 GPR61Q9BZJ8 451 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 MSL2Q9HCI7 577 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SLC39A9Q9NUM3 307 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 LAMP3Q9UQV4 416 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 IGKV1-9A0A0C4DH69 117 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SERPINA7P05543 415 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 RAB5CP51148 216 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CCR5P51681 352 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 C1orf100Q5SVJ3 147 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ARHGEF39Q8N4T4 335 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ADPRHL1Q8NDY3 354 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 RTBDNQ9BSG5 229 aaPredicted RBP8.36□□□□□ -1.07
TPM1-233ENST00000610733 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SLC7A10Q9NS82 523 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 GFOD1Q9NXC2 390 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 C5orf67F2Z3F1 127 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SYNGR4O95473 234 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 CD8AP01732 235 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ACAA1P09110 424 aaPredicted RBP8.36□□□□□ -1.07
TPM1-233ENST00000610733 ATP6V0CP27449 155 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
TPM1-233ENST00000610733 ERVS71-1P61550 626 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ARG2P78540 354 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ZNF266Q14584 549 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 ARL6IP1Q15041 203 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 IFI44Q8TCB0 444 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 HIST1H2BAQ96A08 127 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 GCM1Q9NP62 436 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 FRYQ5TBA9 3013 aa8.36□□□□□ -1.07
TPM1-233ENST00000610733 UBE2L5PA0A1B0GUS4 154 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 EFNA2O43921 213 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 TBPP20226 339 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 BAXQ07812 192 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 ALKBH6Q3KRA9 238 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SPINK14Q6IE38 97 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SYT13Q7L8C5 426 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 DNAJB11Q9UBS4 358 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SH3BGRL2Q9UJC5 107 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SPTBN5Q9NRC6 3674 aaKnown RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 E9PLN8 166 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 TAAR5O14804 337 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SCTP09683 121 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 ACKR3P25106 362 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms