RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.5□□□□□ -0.73
RPS28-204ENST00000602140 HHLA2Q9UM44 414 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
RPS28-204ENST00000602140 ODAMA1E959 279 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 J3QLW9 94 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 J3QRE1 110 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 SLC16A6O15403 523 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 OR2F2O95006 317 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 MPIG6BO95866 241 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 MT-ND2P03891 347 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 AMY1AP04745 511 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 AMY2AP04746 511 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 ZNF19P17023 458 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 CEACAM3P40198 252 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 PTGFRP43088 359 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 RASSF2P50749 326 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 CCR9P51686 369 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 HLA-DRB5Q30154 266 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 KRBOX4Q5JUW0 171 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 Q6P435 159 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 C10orf99Q6UWK7 81 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 OR4X2Q8NGF9 303 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 OR4D6Q8NGJ1 314 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 TRUB1Q8WWH5 349 aaKnown RBP10.49□□□□□ -0.73
RPS28-204ENST00000602140 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 COQ2Q96H96 371 aa10.49□□□□□ -0.73
RPS28-204ENST00000602140 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 OR4C45A6NMZ5 311 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
RPS28-204ENST00000602140 DEGS1O15121 323 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 CSN2P05814 226 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 TMEM225BP0DP42 221 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 NFYBP25208 207 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 OR3A4PP47883 348 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 PRRX1P54821 245 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 SLC35A2P78381 396 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 ALKBH1Q13686 389 aaKnown RBP10.48□□□□□ -0.73
RPS28-204ENST00000602140 RBM39Q14498 530 aaKnown RBP10.48□□□□□ -0.73
RPS28-204ENST00000602140 ATXN7L3Q14CW9 347 aaPredicted RBP10.48□□□□□ -0.73
RPS28-204ENST00000602140 C17orf58Q2M2W7 97 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 UTF1Q5T230 341 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 SAXO1Q8IYX7 474 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 PELI1Q96FA3 418 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 C4orf36Q96KX1 117 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 PPIL3Q9H2H8 161 aaKnown RBP10.48□□□□□ -0.73
RPS28-204ENST00000602140 ZCCHC4Q9H5U6 513 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 RHOFQ9HBH0 211 aa10.48□□□□□ -0.73
RPS28-204ENST00000602140 A0A087X0M5 115 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 A0A1B0GX30 115 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
RPS28-204ENST00000602140 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 HCKP08631 526 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 MNDAP41218 407 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 CDK5R1Q15078 307 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 SLC25A30Q5SVS4 291 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 CCDC144NLQ6NUI1 221 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 ACBD7Q8N6N7 88 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 RCC1LQ96I51 464 aaKnown RBP10.47□□□□□ -0.73
RPS28-204ENST00000602140 OR6C3Q9NZP0 311 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 MYRFQ9Y2G1 1151 aa10.47□□□□□ -0.73
RPS28-204ENST00000602140 KBTBD11-OT1A0A1B0GTJ5 212 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 OOSP1A8MZH6 123 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 H0YJX3 145 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 K7EIL1 84 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 M0QZK8 103 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 HSPB6O14558 160 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 ALPLP05186 524 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 ZP1P60852 638 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 SNRPGP62308 76 aaKnown RBP10.46□□□□□ -0.73
RPS28-204ENST00000602140 KISS1Q15726 138 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 ZIK1Q3SY52 487 aaPredicted RBP10.46□□□□□ -0.73
RPS28-204ENST00000602140 MEDAGQ5VYS4 303 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 OR5D14Q8NGL3 314 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 OR9G1Q8NH87 305 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 KIRREL1Q96J84 757 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.73
RPS28-204ENST00000602140 INPP5EQ9NRR6 644 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 AASSQ9UDR5 926 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.73
RPS28-204ENST00000602140 ORC6Q9Y5N6 252 aa10.46□□□□□ -0.73
RPS28-204ENST00000602140 KIAA2026Q5HYC2 2103 aa10.46□□□□□ -0.74
RPS28-204ENST00000602140 DYNC1I1O14576 645 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 EI24O14681 340 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 SULT1B1O43704 296 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 CIB2O75838 187 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 ATP5HO75947 161 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
RPS28-204ENST00000602140 CLIC3O95833 236 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 IGHV3-7P01780 117 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 CGB3P0DN86 165 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 CGB7P0DN87 165 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 DBTP11182 482 aaKnown RBP10.45□□□□□ -0.74
RPS28-204ENST00000602140 GLP1RP43220 463 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms