RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ZNF154Q13106 437 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 PRR30Q53SZ7 412 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 LPCAT3Q6P1A2 487 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 SPERTQ8NA61 448 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 LILRB4Q8NHJ6 448 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 ASB13Q8WXK3 278 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 S100PBPQ96BU1 408 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 FXYD6Q9H0Q3 95 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 ASF1BQ9NVP2 202 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 PURGQ9UJV8 347 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 TINAGQ9UJW2 476 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 AMDHD2Q9Y303 409 aa14.49□□□□□ -0.09
SHKBP1-216ENST00000598201 FAM25EA8MYX2 175 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 ARPC5O15511 151 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 NAPSAO96009 420 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 KNG1P01042 644 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 CD8AP01732 235 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 EIF2S3LQ2VIR3 472 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 ANKRD55Q3KP44 614 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 ALKBH2Q6NS38 261 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 DPCDQ9BVM2 203 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 CHMP1AQ9HD42 196 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 CDIPTO14735 213 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 MLNRO43193 412 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 PRB1P04280 392 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 OR8G1Q15617 311 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 TEX261Q6UWH6 196 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 SUMF2Q8NBJ7 301 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 PDCD10Q9BUL8 212 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 PLK3Q9H4B4 646 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 U3KQ87 197 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 SHANK1Q9Y566 2161 aa14.48□□□□□ -0.09
SHKBP1-216ENST00000598201 TRAV24A0A0B4J272 114 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 RFPL4AA6NLU0 287 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 HMSDA8MTL9 139 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 RFPL4AL1F8VTS6 287 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 L7N2F9 121 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 HS3ST1O14792 307 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 FCGR2CP31995 323 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 FABP6P51161 128 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 IGSF11Q5DX21 431 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 ZNF767PQ75MW2 155 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 DOLPP1Q86YN1 238 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 OR8G5Q8NG78 346 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 NEK7Q8TDX7 302 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 SFXN3Q9BWM7 321 aa14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 RALYQ9UKM9 306 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 C14orf166Q9Y224 244 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-216ENST00000598201 GRPP07492 148 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 HTR2BP41595 481 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 ZNF83P51522 516 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 ERVK11-1P61568 191 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 IL13RA2Q14627 380 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 OPCMLQ14982 345 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 Q6ZR03 302 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 LINC00596Q86U02 117 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 FAM169BQ8N8A8 192 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 RDH5Q92781 318 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 TOMM40LQ969M1 308 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 BCL2L14Q9BZR8 327 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 Q9N2K0 584 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 TMEM100Q9NV29 134 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 EEF1E1-BLOC1S5C9J1V9 151 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 ADAP1O75689 374 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 CTSDP07339 412 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 SERPINF1P36955 418 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 ECI1P42126 302 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 FXYD4P59646 89 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 GMFBP60983 142 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 NAAAQ02083 359 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 LRRC37A5PQ49AS3 106 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 TIMM23BQ5SRD1 257 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 Q6P435 159 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 C20orf204Q6ZNR8 217 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 ZNF680Q8NEM1 530 aa14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 CLEC4MQ9H2X3 399 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-216ENST00000598201 COL6A6A6NMZ7 2263 aa14.46□□□□□ -0.1
SHKBP1-216ENST00000598201 LOC105371267A0A1B0GV96 52 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 CFDP00746 253 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 KITLGP21583 273 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 MSMPQ1L6U9 139 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 PPP1R1CQ8WVI7 109 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 NRIP2Q9BQI9 281 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 C13orf42A0A1B0GVH6 325 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 MPTX1A8MV57 137 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 B8ZZF3 427 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 M0R233 179 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 TIMM8AO60220 97 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 SCTP09683 121 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 PGA5P0DJD9 388 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF728P0DKX0 622 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 BMP5P22003 454 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 FAM27E3Q08E93 113 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 UNQ6126/PRO20091Q6UXV3 157 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 Q6ZS49 121 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 C22orf34Q6ZV56 151 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF843Q8N446 348 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 MSL2Q9HCI7 577 aa14.45□□□□□ -0.1
SHKBP1-216ENST00000598201 POLDIP2Q9Y2S7 368 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms