RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SSX1Q16384 188 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 PAN3Q58A45 887 aaKnown RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 ATAD3CQ5T2N8 411 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 ZNF773Q6PK81 442 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 ASCL4Q6XD76 172 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 LRRTM1Q86UE6 522 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 PNKDQ8N490 385 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 KIR3DL3Q8N743 410 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 NKAIN3Q8N8D7 197 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 OR4D6Q8NGJ1 314 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 TBC1D15Q8TC07 691 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 PCDHB16Q9NRJ7 776 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 TNFRSF19Q9NS68 423 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 AK6Q9Y3D8 172 aaKnown RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 hCG_1809904A0A1W2PP81 198 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PPE2 198 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PR64 198 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PRV1 198 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 hADV38S2A0JD32 116 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 FUOMA2VDF0 154 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 CCRL2O00421 344 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 GEMIN2O14893 280 aaKnown RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 ZNF780AO75290 641 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 SC5DO75845 299 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 ARL6IP5O75915 188 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 OR7C1O76099 320 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 GTF2F2P13984 249 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 GLIPR1P48060 266 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 RBM11P57052 281 aaKnown RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 BAMBIQ13145 260 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 GPR176Q14439 515 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 IL13RA2Q14627 380 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 KRBOX4Q5JUW0 171 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 UBE2UQ5VVX9 321 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 ZNF782Q6ZMW2 699 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 CDH26Q8IXH8 852 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 OR51T1Q8NGJ9 327 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 NEK7Q8TDX7 302 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 PHYHIPQ92561 330 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 FCGR1BQ92637 280 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 FAM46BQ96A09 425 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 FOXRED1Q96CU9 486 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 ZNF48Q96MX3 618 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 METTL8Q9H825 291 aaKnown RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 SEBOXQ9HB31 216 aaPredicted RBP9.09□□□□□ -0.95
LIG1-211ENST00000596457 PLGRKTQ9HBL7 147 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 IL36GQ9NZH8 169 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 ZNF581Q9P0T4 197 aa9.09□□□□□ -0.95
LIG1-211ENST00000596457 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 RNASEK-C17orf49H0YIS7 233 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 MPIG6BO95866 241 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 ZNF728P0DKX0 622 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 COX7A1P24310 79 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 LMO1P25800 156 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 MEF2CQ06413 473 aaPredicted RBP9.08□□□□□ -0.96
LIG1-211ENST00000596457 P2RY14Q15391 338 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 TAF9Q16594 264 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 KCTD21Q4G0X4 260 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 OR10K2Q6IF99 312 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 C1orf122Q6ZSJ8 110 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 CHST4Q8NCG5 386 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 ZFAND2BQ8WV99 257 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 DMRTB1Q96MA1 342 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 ZNF714Q96N38 554 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 UQCC2Q9BRT2 126 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 KCNK15Q9H427 330 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 NDUFB11Q9NX14 153 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 FAM96BQ9Y3D0 163 aa9.08□□□□□ -0.96
LIG1-211ENST00000596457 TRGV10A0A0A0MS01 117 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 TRAV39A0A0B4J263 110 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 TRAV24A0A0B4J272 114 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 A0A0U1RQK1 487 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 HAX1O00165 279 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 NPFFO15130 113 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 TNFAIP8O95379 198 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 MGMTP16455 207 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 PRTN3P24158 256 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 MYL9P24844 172 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 HTR2CP28335 458 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 P2RX3P56373 397 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 BPIFB3P59826 476 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 HILS1P60008 231 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 KRTAP24-1Q3LI83 254 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 NCR3LG1Q68D85 454 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 C22orf42Q6IC83 251 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 TMEM104Q8NE00 496 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 Q8NFD4 153 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 TSPAN14Q8NG11 270 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 PLPPR1Q8TBJ4 325 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 GFI1Q99684 422 aa9.07□□□□□ -0.96
LIG1-211ENST00000596457 DPCDQ9BVM2 203 aaPredicted RBP9.07□□□□□ -0.96
LIG1-211ENST00000596457 BARHL1Q9BZE3 327 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms