RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
LIG3-215ENST00000592690 INSL4Q14641 139 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 RSU1Q15404 277 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 MED22Q15528 200 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 PIGYQ3MUY2 71 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 AWAT1Q58HT5 328 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 OR51T1Q8NGJ9 327 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 HEXA-AS1Q9H8Q6 139 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 CKLFQ9UBR5 152 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 POMT1Q9Y6A1 747 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 HSPB6O14558 160 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 DEGS1O15121 323 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 RGS10O43665 173 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 MAS1P04201 325 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 PAX6P26367 422 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
LIG3-215ENST00000592690 TGFBR2P37173 567 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 AESQ08117 197 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
LIG3-215ENST00000592690 SPHARQ15513 63 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 Q8NFD4 153 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 COQ2Q96H96 371 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 ING3Q9NXR8 418 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 RAB26Q9ULW5 256 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 ING4Q9UNL4 249 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
LIG3-215ENST00000592690 PAHP00439 452 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 RBP4P02753 201 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 CSN2P05814 226 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 IGHV1-8P0DP01 117 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 SERPINA2P20848 420 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 OMGP23515 440 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 CFPP27918 469 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 VHLP40337 213 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 GLIPR1P48060 266 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 IL13RA2Q14627 380 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 TAF9Q16594 264 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 MIDNQ504T8 468 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 FAM27D1Q5T7N8 215 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 TRAPPC6BQ86SZ2 158 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 TMED9Q9BVK6 235 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 METTL9Q9H1A3 318 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 PPIL3Q9H2H8 161 aaKnown RBP12.78□□□□□ -0.36
LIG3-215ENST00000592690 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
LIG3-215ENST00000592690 TRAV24A0A0B4J272 114 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 A0A1W2PP11 408 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 MMP23AO75900 390 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 CLPXO76031 633 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
LIG3-215ENST00000592690 FOXL1Q12952 345 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.37
LIG3-215ENST00000592690 KRBOX4Q5JUW0 171 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 JAGN1Q8N5M9 183 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 MUL1Q969V5 352 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
LIG3-215ENST00000592690 UBE2J1Q9Y385 318 aaPredicted RBP12.77□□□□□ -0.37
LIG3-215ENST00000592690 ODAMA1E959 279 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 ODF3BA8MYP8 253 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 HAX1O00165 279 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 GPR137BO60478 399 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 CSTBP04080 98 aaKnown RBP12.76□□□□□ -0.37
LIG3-215ENST00000592690 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
LIG3-215ENST00000592690 MAP2K4P45985 399 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
LIG3-215ENST00000592690 RELBQ01201 579 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 SLC22A6Q4U2R8 563 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 ACSM3Q53FZ2 586 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 LIPKQ5VXJ0 399 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 LHFPL4Q7Z7J7 247 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 LYPD6Q86Y78 171 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 OSR2Q8N2R0 312 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 MS4A15Q8N5U1 240 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 OR13D1Q8NGV5 346 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 THRSPQ92748 146 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 S100A13Q99584 98 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 C1RLQ9NZP8 487 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 VPREB3Q9UKI3 123 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 ST3GAL6Q9Y274 331 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 MRPS28Q9Y2Q9 187 aaKnown RBP12.76□□□□□ -0.37
LIG3-215ENST00000592690 SESN1Q9Y6P5 492 aa12.76□□□□□ -0.37
LIG3-215ENST00000592690 TRGV10A0A0A0MS01 117 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 GEMIN2O14893 280 aaKnown RBP12.75□□□□□ -0.37
LIG3-215ENST00000592690 ARG1P05089 322 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 HSMCR30P0CW71 290 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
LIG3-215ENST00000592690 GDNFP39905 211 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 NHLRC3Q5JS37 347 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms