RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RRP15Q9Y3B9 282 aaKnown RBP11.38□□□□□ -0.59
CLIP3-205ENST00000592017 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
CLIP3-205ENST00000592017 hADV38S2A0JD32 116 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 DEGS1O15121 323 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 PAHP00439 452 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 CSTBP04080 98 aaKnown RBP11.37□□□□□ -0.59
CLIP3-205ENST00000592017 CD1AP06126 327 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 SERPINA2P20848 420 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 OMGP23515 440 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 MAP2K4P45985 399 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 UBE2E1P51965 193 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 P2RX3P56373 397 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 ATXN7L3Q14CW9 347 aaPredicted RBP11.37□□□□□ -0.59
CLIP3-205ENST00000592017 RBM48Q5RL73 367 aaKnown RBP11.37□□□□□ -0.59
CLIP3-205ENST00000592017 LIPKQ5VXJ0 399 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 Q6P435 159 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 TCF23Q7RTU1 214 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 CHST4Q8NCG5 386 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 THRSPQ92748 146 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 MUL1Q969V5 352 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 CHIAQ9BZP6 476 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 Q9H521 79 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
CLIP3-205ENST00000592017 BLOC1S6Q9UL45 172 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 FOXJ3Q9UPW0 622 aa11.37□□□□□ -0.59
CLIP3-205ENST00000592017 SF3B6Q9Y3B4 125 aaKnown RBP11.37□□□□□ -0.59
CLIP3-205ENST00000592017 A0A0G2JK05 382 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 SLC33A1O00400 549 aaPredicted RBP11.36□□□□□ -0.59
CLIP3-205ENST00000592017 PIN1P1O15428 100 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 GPX5O75715 221 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 FBP1P09467 338 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 ZNF728P0DKX0 622 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 MDKP21741 143 aaPredicted RBP11.36□□□□□ -0.59
CLIP3-205ENST00000592017 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
CLIP3-205ENST00000592017 AESQ08117 197 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 ACSM3Q53FZ2 586 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 PAN3Q58A45 887 aaKnown RBP11.36□□□□□ -0.59
CLIP3-205ENST00000592017 FAM27D1Q5T7N8 215 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 ELP2Q6IA86 826 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 PRSS48Q7RTY5 328 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 TMEM86BQ8N661 226 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 HEXA-AS1Q9H8Q6 139 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 MRPS28Q9Y2Q9 187 aaKnown RBP11.36□□□□□ -0.59
CLIP3-205ENST00000592017 LINC00312Q9Y6C7 94 aa11.36□□□□□ -0.59
CLIP3-205ENST00000592017 C17orf98A8MV24 154 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 IGHV4-59P01825 116 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 LMO1P25800 156 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 GLIPR1P48060 266 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 DLX6P56179 175 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 RELBQ01201 579 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 IL13RA2Q14627 380 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 SLC22A6Q4U2R8 563 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 KRBOX4Q5JUW0 171 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 SHISA2Q6UWI4 295 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 C11orf42Q8N5U0 333 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 MS4A15Q8N5U1 240 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 SSMEM1Q8WWF3 244 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 TMEM203Q969S6 136 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 TCF7L1Q9HCS4 588 aa11.35□□□□□ -0.59
CLIP3-205ENST00000592017 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 A0A1W2PP11 408 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 FUOMA2VDF0 154 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 POM121CA8CG34 1229 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 CLPXO76031 633 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 IGHV1-8P0DP01 117 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 LGALS4P56470 323 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 RBM11P57052 281 aaKnown RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 RPS25P62851 125 aaKnown RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 MLLT11Q13015 90 aaPredicted RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 DYNC1I2Q13409 638 aaKnown RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 GLIPR1L1Q6UWM5 242 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 ASCL4Q6XD76 172 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 CEACAM19Q7Z692 300 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 LDLRAD3Q86YD5 345 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 NKAIN3Q8N8D7 197 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 OR51T1Q8NGJ9 327 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 OR13D1Q8NGV5 346 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 C17orf50Q8WW18 174 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 COQ2Q96H96 371 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 PPIL3Q9H2H8 161 aaKnown RBP11.34□□□□□ -0.59
CLIP3-205ENST00000592017 IL36GQ9NZH8 169 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 ST3GAL6Q9Y274 331 aa11.34□□□□□ -0.59
CLIP3-205ENST00000592017 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 TRAV24A0A0B4J272 114 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ODAMA1E959 279 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 BTBD17A6NE02 478 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ZNF780AO75290 641 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms