RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	TK1	P04183	234 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	NPY4R	P50391	375 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	MOGAT2	Q3SYC2	334 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	PAN3	Q58A45	887 aa	Known RBP	13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	LRRC10	Q5BKY1	277 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	CMTM4	Q8IZR5	234 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	OR8H2	Q8N162	312 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	SUMF2	Q8NBJ7	301 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	TMEM185A	Q8NFB2	350 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	OR4S1	Q8NGB4	309 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	OR5D13	Q8NGL4	314 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	OR10R2	Q8NGX6	335 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	DPCD	Q9BVM2	203 aa	Predicted RBP	13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	SHARPIN	Q9H0F6	387 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	HSF4	Q9ULV5	492 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	PEX16	Q9Y5Y5	336 aa		13.85	□□□□□ -0.19
TCF3-208	ENST00000586318	CTDSP2	O14595	271 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	RGS5	O15539	181 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	FCN3	O75636	299 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	CSN2	P05814	226 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	EIF4E	P06730	217 aa	Known RBP	13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	OR3A1	P47881	315 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	KCNJ3	P48549	501 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	TMEM50B	P56557	158 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	RBM39	Q14498	530 aa	Known RBP	13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	ESCO2	Q56NI9	601 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	NKAPL	Q5M9Q1	402 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	WDR25	Q64LD2	544 aa	Predicted RBP	13.84	□□□□□ -0.19
TCF3-208	ENST00000586318		Q6ZTK2	550 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	PHF21A	Q96BD5	680 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	RAB3C	Q96E17	227 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	S100A16	Q96FQ6	103 aa	Known RBP	13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	PPA2	Q9H2U2	334 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	MIXL1	Q9H2W2	232 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	DIABLO	Q9NR28	239 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	CLN8	Q9UBY8	286 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	ADAM30	Q9UKF2	790 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	CCDC168	Q8NDH2	2452 aa		13.84	□□□□□ -0.19
TCF3-208	ENST00000586318	NOTCH2	Q04721	2471 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318		A8MXK9	166 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	MCRIP1	C9JLW8	97 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	HSPB6	O14558	160 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	MGST3	O14880	152 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	GPR37	O15354	613 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	ELK1	P19419	428 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	IL2RG	P31785	369 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	SEC61A1	P61619	476 aa	Known RBP	13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	GNB2	P62879	340 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	GRK1	Q15835	563 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	PLAC9	Q5JTB6	97 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	ARHGAP5-AS1	Q96IT6	56 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	PECR	Q9BY49	303 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	CHST6	Q9GZX3	395 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	PLEKHJ1	Q9NW61	149 aa		13.83	□□□□□ -0.2
TCF3-208	ENST00000586318	FAM25A	B3EWG3	89 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	FAM25C	B3EWG5	89 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	FAM25G	B3EWG6	89 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	XRCC3	O43542	346 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	HIST1H1D	P16402	221 aa	Known RBP	13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	NDUFB7	P17568	137 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	CDK2	P24941	298 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	ARL6IP1	Q15041	203 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	C11orf91	Q3C1V1	193 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	BRICD5	Q6PL45	260 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	C6orf201	Q7Z4U5	140 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	LAX1	Q8IWV1	398 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	FGFRL1	Q8N441	504 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	BPIFB2	Q8N4F0	458 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	NEK7	Q8TDX7	302 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	ST8SIA4	Q92187	359 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	C1orf159	Q96HA4	380 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	SULT4A1	Q9BR01	284 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	PTTG2	Q9NZH5	202 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	DOCK11	Q5JSL3	2073 aa		13.82	□□□□□ -0.2
TCF3-208	ENST00000586318	CR1	P17927	2039 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	MALRD1	Q5VYJ5	2156 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	UBE2QL1	A1L167	161 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	CYSRT1	A8MQ03	144 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	FAM157A	C9JC47	383 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	MFNG	O00587	321 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	FOXH1	O75593	365 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	CLPX	O76031	633 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	ERP29	P30040	261 aa	Known RBP	13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	PAX5	Q02548	391 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	GDPD3	Q7L5L3	318 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	PLPPR1	Q8TBJ4	325 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	COQ2	Q96H96	371 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	WDFY2	Q96P53	400 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	FAAP24	Q9BTP7	215 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	ETAA1	Q9NY74	926 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	EXTL2	Q9UBQ6	330 aa		13.81	□□□□□ -0.2
TCF3-208	ENST00000586318	TRAV18	A0A075B6X5	111 aa		13.8	□□□□□ -0.2
TCF3-208	ENST00000586318	FUOM	A2VDF0	154 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms