RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 GLAP06280 429 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FOSL1P15407 271 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 GNB3P16520 340 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MNDAP41218 407 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 GPR6P46095 362 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TAS2R20P59543 309 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 COL10A1Q03692 680 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF260Q3ZCT1 412 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TMEM69Q5SWH9 247 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 BRICD5Q6PL45 260 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 C6orf201Q7Z4U5 140 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CCL13Q99616 98 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 RABL2AQ9UBK7 228 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 RABL2BQ9UNT1 228 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MRPS7Q9Y2R9 242 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MAB21L2Q9Y586 359 aa13.64□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TMEM82A0PJX8 343 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MELTFP08582 738 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CSF3P09919 207 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 HIST1H1DP16402 221 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 NR4A2P43354 598 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DSCR9P59020 149 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MADCAM1Q13477 382 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ARL6IP1Q15041 203 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 NKAPLQ5M9Q1 402 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SPANXN2Q5MJ10 180 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 LYPD2Q6UXB3 125 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 BAIAP2L2Q6UXY1 529 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DNM1P46Q6ZS02 220 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MUC20Q8N307 709 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ST8SIA4Q92187 359 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SNX22Q96L94 193 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 GAFA1Q96PS6 74 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ABHD1Q96SE0 405 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SULT4A1Q9BR01 284 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FAAP24Q9BTP7 215 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DPCDQ9BVM2 203 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 AUNIPQ9H7T9 357 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZMAT3Q9HA38 289 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 V9GYH0 126 aa13.63□□□□□ -0.23
CDK5RAP3-228ENST00000583363 A0A0G2JMP0 313 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 A0A0X1KG70 313 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MCRIP1C9JLW8 97 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 NDUFS8O00217 210 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MFNGO00587 321 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SIGLEC5O15389 551 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PSPNO60542 156 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF737O75373 536 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 GSTP1P09211 210 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 INHBBP09529 407 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF45Q02386 682 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 IL18Q14116 193 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PAN3Q58A45 887 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 OLFML2AQ68BL7 652 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PYHIN1Q6K0P9 492 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FAM131AQ6UXB0 335 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 C17orf107Q6ZR85 190 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DCDC5Q6ZRR9 648 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MFSD4AQ8N468 514 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 BPIFB2Q8N4F0 458 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF561Q8N587 486 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 WFDC11Q8NEX6 87 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 OR4M2Q8NGB6 313 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 C10orf105Q8TEF2 133 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 S100ZQ8WXG8 99 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FAM168AQ92567 244 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MED30Q96HR3 178 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SMR3AQ99954 134 aa13.62□□□□□ -0.23
CDK5RAP3-228ENST00000583363 A0A1B0GW55 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ISPDA4D126 451 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 K7N7A8 449 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L2P0CJ85 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L3P0CJ86 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L4P0CJ87 422 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L5P0CJ88 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L6P0CJ89 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L7P0CJ90 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PITPNAQ00169 270 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 RBM39Q14498 530 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PNLIPRP3Q17RR3 467 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SHEQ5VZ18 495 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4L9Q6RFH8 374 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CLEC2AQ6UVW9 174 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 Q71RC1 249 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SLC36A1Q7Z2H8 476 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNRF1Q8ND25 227 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 OR4S1Q8NGB4 309 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PPP1R35Q8TAP8 253 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms