RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 KDM4BO94953 1096 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 CGB3P0DN86 165 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 CGB7P0DN87 165 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 GDNFP39905 211 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 CCR9P51686 369 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 PRRX1P54821 245 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 SNU13P55769 128 aaKnown RBP8.43□□□□□ -1.06
RFFL-209ENST00000581265 KRTAP10-11P60412 298 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 EGFEM1PQ0D2K5 195 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 HLA-DRB5Q30154 266 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 TP53I3Q53FA7 332 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 KLHL22Q53GT1 634 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 TPTE2P1Q5T6R2 138 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 CCDC144NLQ6NUI1 221 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 Q6P435 159 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 THNSL2Q86YJ6 484 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 SAXO1Q8IYX7 474 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 OSR2Q8N2R0 312 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 CHST4Q8NCG5 386 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 OR4D6Q8NGJ1 314 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 TRUB1Q8WWH5 349 aaKnown RBP8.43□□□□□ -1.06
RFFL-209ENST00000581265 GABARAPL3Q9BY60 117 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 ZNF286AQ9HBT8 521 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
RFFL-209ENST00000581265 WI2-2373I1.2A0A1W2PRP0 233 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A9PA6NNJ1 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A5PA8MXJ8 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 J3QRE1 110 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 CLIC3O95833 236 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A15PP0C7V4 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A13PP0C7W8 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A14PP0C7W9 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM90A24PP0C7X0 464 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 FAM106CPP0CH98 169 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 ZNF20P17024 532 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 MNDAP41218 407 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 PTGFRP43088 359 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 NANOS3P60323 173 aaKnown RBP8.42□□□□□ -1.06
RFFL-209ENST00000581265 C17orf58Q2M2W7 97 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 SLC25A30Q5SVS4 291 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 RNF144BQ7Z419 303 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 AMIGO2Q86SJ2 522 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 LINC00482Q8N8I6 264 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 OR9G1Q8NH87 305 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 BCAS4Q8TDM0 211 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 COQ2Q96H96 371 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 NCOR1P1Q9H4R4 102 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 OR6C3Q9NZP0 311 aa8.42□□□□□ -1.06
RFFL-209ENST00000581265 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 FAM172BPA6NC97 362 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 SH2D7A6NKC9 451 aaPredicted RBP8.41□□□□□ -1.06
RFFL-209ENST00000581265 SLC33A1O00400 549 aaPredicted RBP8.41□□□□□ -1.06
RFFL-209ENST00000581265 DEGS1O15121 323 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 SLC16A6O15403 523 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 OCM2P0CE71 109 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 OCMP0CE72 109 aaPredicted RBP8.41□□□□□ -1.06
RFFL-209ENST00000581265 FCGR1AP12314 374 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 ZNF44P15621 663 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 SCN1BQ07699 218 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 KRBOX4Q5JUW0 171 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 UTF1Q5T230 341 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 MRPL41Q8IXM3 137 aaKnown RBP8.41□□□□□ -1.06
RFFL-209ENST00000581265 ZNF565Q8N9K5 539 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 OR51A4Q8NGJ6 313 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 OR10AC1Q8NH08 325 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 RFT1Q96AA3 541 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 CENPNQ96H22 339 aaPredicted RBP8.41□□□□□ -1.06
RFFL-209ENST00000581265 KIRREL1Q96J84 757 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 HRASLS5Q96KN8 279 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 SPACA5Q96QH8 159 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 OSBPL10Q9BXB5 764 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 GPR61Q9BZJ8 451 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 LINC00574Q9H8X3 128 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 PCDHB16Q9NRJ7 776 aa8.41□□□□□ -1.06
RFFL-209ENST00000581265 DAPL1A0PJW8 107 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR4C45A6NMZ5 311 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 C3orf84H3BNL1 204 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 HTR1AP08908 422 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 DBTP11182 482 aaKnown RBP8.4□□□□□ -1.06
RFFL-209ENST00000581265 SLC6A1P30531 599 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR3A4PP47883 348 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 BNIP1Q12981 228 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 RBM39Q14498 530 aaKnown RBP8.4□□□□□ -1.06
RFFL-209ENST00000581265 KHDC1LQ5JSQ8 128 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 C9orf152Q5JTZ5 239 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 ELP2Q6IA86 826 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 ACBD7Q8N6N7 88 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR51T1Q8NGJ9 327 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR5D18Q8NGL1 313 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR13C3Q8NGS6 347 aa8.4□□□□□ -1.06
RFFL-209ENST00000581265 OR13C9Q8NGT0 318 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms