RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FPR2P25090 351 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 ERP29P30040 261 aaKnown RBP9.09□□□□□ -0.95
CHD3-216ENST00000573936 EDDM3BP56851 147 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
CHD3-216ENST00000573936 MPV17LQ2QL34 196 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 C1orf100Q5SVJ3 147 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 GPR107Q5VW38 600 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 Q6P435 159 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 C17orf107Q6ZR85 190 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 SLC16A12Q6ZSM3 486 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 FAM185AQ8N0U4 392 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 OR4D6Q8NGJ1 314 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 NKX3-1Q99801 234 aaPredicted RBP9.09□□□□□ -0.95
CHD3-216ENST00000573936 PCGF1Q9BSM1 259 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 NAA50Q9GZZ1 169 aaKnown RBP9.09□□□□□ -0.95
CHD3-216ENST00000573936 SIRPDQ9H106 197 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 PPIL3Q9H2H8 161 aaKnown RBP9.09□□□□□ -0.95
CHD3-216ENST00000573936 IFT22Q9H7X7 185 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 STUB1Q9UNE7 303 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 ST3GAL6Q9Y274 331 aa9.09□□□□□ -0.95
CHD3-216ENST00000573936 A0A0G2JK05 382 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 hADV38S2A0JD32 116 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 TMEM82A0PJX8 343 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A10PA6NDY2 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A18PA6NE21 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A16PA6NEW6 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A20PA6NIJ5 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A8PA6NJQ4 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A7PA6NKC0 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A22PA8MWA6 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A12PA8MX19 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A5PA8MXJ8 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A23PA8MXZ1 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 PSPNO60542 156 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FSHBP01225 129 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 CSN2P05814 226 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A15PP0C7V4 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A13PP0C7W8 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A14PP0C7W9 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FAM90A24PP0C7X0 464 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 MMP9P14780 707 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 EPHA1P21709 976 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 HTR2CP28335 458 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 FGF9P31371 208 aaPredicted RBP9.08□□□□□ -0.96
CHD3-216ENST00000573936 KCNJ3P48549 501 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 RBM11P57052 281 aaKnown RBP9.08□□□□□ -0.96
CHD3-216ENST00000573936 GPR157Q5UAW9 335 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 CLVS1Q8IUQ0 354 aaPredicted RBP9.08□□□□□ -0.96
CHD3-216ENST00000573936 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 OR6M1Q8NGM8 313 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 CHCHD6Q9BRQ6 235 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 CHST6Q9GZX3 395 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 CST11Q9H112 138 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 PLGRKTQ9HBL7 147 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 V9GY05 133 aa9.08□□□□□ -0.96
CHD3-216ENST00000573936 LOC100506127A0A0U1RQW1 187 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 DPPA5A6NC42 116 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 SLC33A1O00400 549 aaPredicted RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 SLC17A2O00624 439 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 SLC22A1O15245 554 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 AIREO43918 545 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 CRTAPO75718 401 aaPredicted RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 GABARAPO95166 117 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 BPNT1O95861 308 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 OR3A1P47881 315 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 EDDM3AQ14507 147 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 PIGYQ3MUY2 71 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 TIMM50Q3ZCQ8 353 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 PAN3Q58A45 887 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 NCR3LG1Q68D85 454 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 C22orf42Q6IC83 251 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 VMO1Q7Z5L0 202 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 KCNG3Q8TAE7 436 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 TBX15Q96SF7 602 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 BARHL1Q9BZE3 327 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 MS4A7Q9GZW8 240 aaPredicted RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 RBM38Q9H0Z9 239 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 RNF167Q9H6Y7 350 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 METTL8Q9H825 291 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 UNKLQ9H9P5 680 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 C19orf12Q9NSK7 152 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 TXNL4BQ9NX01 149 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 AK6Q9Y3D8 172 aaKnown RBP9.07□□□□□ -0.96
CHD3-216ENST00000573936 LINC00312Q9Y6C7 94 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 CEPT1Q9Y6K0 416 aa9.07□□□□□ -0.96
CHD3-216ENST00000573936 A0A0A6YYJ9 748 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 TRAV40A0A0B4J280 105 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 GEMIN2O14893 280 aaKnown RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 OR7C1O76099 320 aaPredicted RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 RBP4P02753 201 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 GLAP06280 429 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 MGMTP16455 207 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms