RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OR51D1Q8NGF3 324 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 OR10K1Q8NGX5 313 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 TBC1D15Q8TC07 691 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 AP3S1Q92572 193 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 FAM3DQ96BQ1 224 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 PCGF1Q9BSM1 259 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 METTL9Q9H1A3 318 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 TOX4O94842 621 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 PAHP00439 452 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 LIPFP07098 398 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 CALCBP10092 127 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 BCL3P20749 454 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 NPBWR2P48146 333 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 FOXL1Q12952 345 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 MICBQ29980 383 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 C11orf91Q3C1V1 193 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 C2orf76Q3KRA6 126 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 SLC22A6Q4U2R8 563 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 STUMQ69YW2 141 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 OR10Z1Q8NGY1 313 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 LGALS14Q8TCE9 139 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 ACOT12Q8WYK0 555 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 ST8SIA4Q92187 359 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
RAB40B-203ENST00000570676 CEP19Q96LK0 163 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 WDFY2Q96P53 400 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 CCL13Q99616 98 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 SLIRPQ9GZT3 109 aaKnown RBP12.45□□□□□ -0.42
RAB40B-203ENST00000570676 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 MTCH1Q9NZJ7 389 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 ABRACLQ9P1F3 81 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 GHRLQ9UBU3 117 aa12.45□□□□□ -0.42
RAB40B-203ENST00000570676 RPUSD1Q9UJJ7 312 aaKnown RBP12.45□□□□□ -0.42
RAB40B-203ENST00000570676 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-203ENST00000570676 AKR7A2O43488 359 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 KDM4BO94953 1096 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 HTR3BO95264 441 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-203ENST00000570676 PGA5P0DJD9 388 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 VSIG8P0DPA2 414 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 SERPINA2P20848 420 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 CAPZA1P52907 286 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 BPIFB3P59826 476 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 GMFBP60983 142 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 GPR176Q14439 515 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 OR10K2Q6IF99 312 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 MZT2AQ6P582 158 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 POC1AQ8NBT0 407 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 MCFD2Q8NI22 146 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 TAF15Q92804 592 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB40B-203ENST00000570676 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 WDR13Q9H1Z4 485 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 PCDHB16Q9NRJ7 776 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
RAB40B-203ENST00000570676 TMEM272A0A1B0GTI8 110 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 F8VVB4 439 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 F8VWA3 439 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 NOS1APO75052 506 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 NXPH2O95156 264 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 CSTBP04080 98 aaKnown RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 ACAA1P09110 424 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 SELLP14151 372 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 SCAND1P57086 179 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 QRFPP83859 136 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 DYNC1I2Q13409 638 aaKnown RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 ATPAF1Q5TC12 328 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 METTL11BQ5VVY1 283 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 SLC36A1Q7Z2H8 476 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 OR2W3Q7Z3T1 314 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 Q8IYB0 196 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 LY6G5BQ8NDX9 201 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 OR5H6Q8NGV6 325 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 KCNG3Q8TAE7 436 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 EMG1Q92979 244 aaKnown RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 NXF2Q9GZY0 626 aaKnown RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 CST11Q9H112 138 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 BANF2Q9H503 90 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
RAB40B-203ENST00000570676 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
RAB40B-203ENST00000570676 A0A075B6Q4 140 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 A0A1W2PP11 408 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 TMEM14DPA8MWL7 114 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 LDLRAD4O15165 306 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 MPIG6BO95866 241 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 TFF1P04155 84 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 GLRA1P23415 457 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 ARF6P62330 175 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 PLA2G7Q13093 441 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 UNC119Q13432 240 aa12.42□□□□□ -0.42
RAB40B-203ENST00000570676 PDCD1Q15116 288 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms