RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ERVK11-1P61568 191 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 GRK1Q15835 563 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TATDN3Q17R31 274 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 PYHIN1Q6K0P9 492 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 MOB3BQ86TA1 216 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 KIRREL3Q8IZU9 778 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 LINC00471Q8N535 108 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TCTEX1D1Q8N7M0 179 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TMEM104Q8NE00 496 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 OR52N4Q8NGI2 321 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 OR4D6Q8NGJ1 314 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 GTF2H4Q92759 462 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 C17orf77Q96MU5 243 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 SPACA5Q96QH8 159 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 GPX7Q96SL4 187 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 MBOAT4Q96T53 435 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 C20orf27Q9GZN8 174 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 ZCCHC4Q9H5U6 513 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF319Q9P2F9 582 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 SLC7A11Q9UPY5 501 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 FOXA2Q9Y261 457 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 POLDIP2Q9Y2S7 368 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TNXBP22105 4242 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 IGHV7-81A0A0B4J1V7 117 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 IGHV3-72A0A0B4J1Y9 119 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 TRAV10A0A0B4J240 114 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 HSD17B6O14756 317 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 MGST3O14880 152 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 AIREO43918 545 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 OR2A4O95047 310 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 IFNA10P01566 189 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 CD74P04233 296 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 GAPDHP04406 335 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 NCK1P16333 377 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 GPX2P18283 190 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 PPIBP23284 216 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 RPS27P42677 84 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 CX3CR1P49238 355 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 CRIP2P52943 208 aaPredicted RBP4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 P2RX3P56373 397 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 PRKCDQ05655 676 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 TAF13Q15543 124 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 GUCA2BQ16661 112 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 DEFB114Q30KQ6 69 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 ZBED5Q49AG3 693 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 LCN1P1Q5VSP4 162 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 Q6ZSN1 163 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 DCXRQ7Z4W1 244 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 ANGPTL5Q86XS5 388 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 CASTOR1Q8WTX7 329 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 TSPEARQ8WU66 669 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 RASSF5Q8WWW0 418 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 SORT1Q99523 831 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 PARP11Q9NR21 331 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 SLC25A37Q9NYZ2 338 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF878C9JN71 531 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 CDC42EP2O14613 210 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 NDUFB2O95178 105 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 RENP00797 406 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 IGHA1P01876 353 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 HLA-DQA2P01906 255 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 HLA-DRB1P01911 266 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 APOC1P02654 83 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 SLC2A2P11168 524 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 MPZP25189 248 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 SLC15A1P46059 708 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 HAAOP46952 286 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 GYS2P54840 703 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 TPPP2P59282 170 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 GRB2P62993 217 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 ADARB1P78563 741 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 DYRK1AQ13627 763 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 SLX4IPQ5VYV7 408 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 FAM57BQ71RH2 274 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 ZNF573Q86YE8 665 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 MSRB3Q8IXL7 192 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 NRMQ8IXM6 262 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 RNF148Q8N7C7 305 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 YIPF7Q8N8F6 280 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 TMEM163Q8TC26 289 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 SLAMF6Q96DU3 332 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 CHST6Q9GZX3 395 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 FAM107BQ9H098 131 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 NSRP1Q9H0G5 558 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 CENPMQ9NSP4 180 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 PSG11Q9UQ72 335 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 ERGIC3Q9Y282 383 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 KLHDC2Q9Y2U9 406 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 IER3IP1Q9Y5U9 82 aa4.83□□□□□ -1.64
HERPUD1-217ENST00000569429 A0A0G2JND7 137 aa4.82□□□□□ -1.64
HERPUD1-217ENST00000569429 FUOMA2VDF0 154 aa4.82□□□□□ -1.64
HERPUD1-217ENST00000569429 ZNF729A6NN14 1252 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms