RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FGF21Q9NSA1 209 aa17.77■□□□□ 0.44
MAP1LC3B-206ENST00000564844 DOCK11Q5JSL3 2073 aa17.77■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GNRHRP30968 328 aa17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 FAM189A2Q15884 450 aa17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TMEM252Q8N6L7 170 aa17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 THOC3Q96J01 351 aaKnown RBP17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 C18orf12Q96KH6 178 aa17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ST3GAL6Q9Y274 331 aa17.77■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CD55P08174 381 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 RPS18P62269 152 aaKnown RBP17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 METTL9Q9H1A3 318 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CALHM2Q9HA72 323 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 LRP4O75096 1905 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 IFNL4K9M1U5 179 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 LCATP04180 440 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 APLNRP35414 380 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 FASLGP48023 281 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 PLPPR5Q32ZL2 321 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 HIST2H3PS2Q5TEC6 136 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 DPPA2Q7Z7J5 298 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 RSG1Q9BU20 258 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ZNF665Q9H7R5 613 aa17.76■□□□□ 0.43
MAP1LC3B-206ENST00000564844 POU2F2P09086 479 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TMEM267Q0VDI3 215 aaPredicted RBP17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 FBXO46Q6PJ61 603 aaPredicted RBP17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 IGKV1-12A0A0C4DH73 117 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 IGKV1D-12P01611 117 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 IL13RA2Q14627 380 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 Q6ZPA2 131 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 LFNGQ8NES3 379 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 VSIRQ9H7M9 311 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 C3orf85A0A1B0GTC6 90 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TSTD3H0UI37 97 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CHST1O43916 411 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 GDF9O60383 454 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 IL2RGP31785 369 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CD200P41217 278 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SUCLG1P53597 346 aaKnown RBP17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CASP6P55212 293 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 OR5T1Q8NG75 326 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CPNE4Q96A23 557 aaPredicted RBP17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SYT3Q9BQG1 590 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 FBRSQ9HAH7 460 aa17.75■□□□□ 0.43
MAP1LC3B-206ENST00000564844 A0A1W2PPC4 97 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 G0S2P27469 103 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 GRB2P62993 217 aaKnown RBP17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MRPS34P82930 218 aaKnown RBP17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SSX2Q16385 188 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TM2D1Q9BX74 207 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SMCO3A2RU48 225 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TGIF2LXQ8IUE1 241 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 BORCS8Q96FH0 119 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 PISDQ9UG56 409 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 GAB2Q9UQC2 676 aa17.74■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 HSPA12AO43301 675 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ZNF266Q14584 549 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TBC1D26Q86UD7 250 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 STX12Q86Y82 276 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 PIGCQ92535 297 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SLC7A10Q9NS82 523 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CYTIPO60759 359 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MSR1P21757 451 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CCL1P22362 96 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 GLIPR1P48060 266 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 HLA-DRB3P79483 266 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 GJC3Q8NFK1 279 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 HIST1H2BLQ99880 126 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 LRFN1Q9P244 771 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 A0A1B0GX78 115 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SOX15O60248 233 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ZNF774Q6NX45 483 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 OR4D5Q8NGN0 318 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MVB12AQ96EY5 273 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 KIAA1456Q9P272 454 aa17.73■□□□□ 0.43
MAP1LC3B-206ENST00000564844 COL4A2P08572 1712 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MPPED1O15442 326 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 TIAF1O95411 115 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MMP7P09237 267 aaPredicted RBP17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 NPBWR2P48146 333 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ENDOGQ14249 297 aaKnown RBP17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 D2HGDHQ8N465 521 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 KDF1Q8NAX2 398 aaPredicted RBP17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 OR6X1Q8NH79 312 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 AKIRIN1Q9H9L7 192 aaPredicted RBP17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 WASF3Q9UPY6 502 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 LMO1P25800 156 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 SSTP61278 116 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ZNF468Q5VIY5 522 aaPredicted RBP17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 REC114Q7Z4M0 266 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 NEK7Q8TDX7 302 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 OXGR1Q96P68 337 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CABLES2Q9BTV7 478 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 MMP17Q9ULZ9 603 aa17.72■□□□□ 0.43
MAP1LC3B-206ENST00000564844 PPYP01298 95 aa17.71■□□□□ 0.43
MAP1LC3B-206ENST00000564844 CELA2AP08217 269 aa17.71■□□□□ 0.43
MAP1LC3B-206ENST00000564844 DRD1P21728 446 aa17.71■□□□□ 0.43
MAP1LC3B-206ENST00000564844 ZNF133P52736 654 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms