RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FPR2P25090 351 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 GATA4P43694 442 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 KCNJ3P48549 501 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 ZNF81P51508 661 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 MSMPQ1L6U9 139 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 C4orf46Q504U0 113 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 MOB1BQ7L9L4 216 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 LRP11Q86VZ4 500 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 LHFPL1Q86WI0 220 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 SPICQ8N5J4 248 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 GALNT11Q8NCW6 608 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 PRR7Q8TB68 274 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 ZNF431Q8TF32 576 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-210ENST00000564587 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 HDHD3Q9BSH5 251 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-210ENST00000564587 BEX2Q9BXY8 128 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
COMMD4-210ENST00000564587 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 CD3EP07766 207 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 OR4E1P0C645 316 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 VSIG10L2P0DP72 767 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ANXA3P12429 323 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 LMO1P25800 156 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 GLP1RP43220 463 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 PDCD1Q15116 288 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 FCN2Q15485 313 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
COMMD4-210ENST00000564587 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 DHRS11Q6UWP2 260 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ACP7Q6ZNF0 438 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ASB13Q8WXK3 278 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 Q9N2K0 584 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ZNF581Q9P0T4 197 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 ZNF69Q9UC07 566 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
COMMD4-210ENST00000564587 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
COMMD4-210ENST00000564587 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 OR2AT4A6NND4 320 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 OR2H2O95918 312 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 HAND1O96004 215 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 HPXP02790 462 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 OR5H8P0DN80 308 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 AGAP20933 346 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 DUSP1P28562 367 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 CD83Q01151 205 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 CD300CQ08708 224 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 C4orf17Q53FE4 359 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 BEX5Q5H9J7 111 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 BRICD5Q6PL45 260 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 PEG10Q86TG7 708 aaKnown RBP13.15□□□□□ -0.3
COMMD4-210ENST00000564587 TMEM185AQ8NFB2 350 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 MAFIPQ8WZ33 124 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 SEC22CQ9BRL7 303 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 RANGRFQ9HD47 186 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-210ENST00000564587 IL36RNQ9UBH0 155 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 VSIG4Q9Y279 399 aa13.15□□□□□ -0.3
COMMD4-210ENST00000564587 PCNX1Q96RV3 2341 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 MEIKINA0A087WXM9 373 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 SRRM5B3KS81 715 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 TRDCB7Z8K6 153 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 SLC33A1O00400 549 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-210ENST00000564587 HS3ST1O14792 307 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 CD55P08174 381 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 OR4A8P0C604 315 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 TNFRSF1AP19438 455 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 TNFAIP6P98066 277 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-210ENST00000564587 MPPED2Q15777 294 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF880Q6PDB4 577 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 LURAP1LQ8IV03 231 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 DRAXINQ8NBI3 349 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-210ENST00000564587 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 PPP1R35Q8TAP8 253 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 MARCH1Q8TCQ1 289 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 RDH5Q92781 318 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 UFSP2Q9NUQ7 469 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 C14orf166Q9Y224 244 aaKnown RBP13.14□□□□□ -0.31
COMMD4-210ENST00000564587 NPTNQ9Y639 398 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 KALRNO60229 2985 aa13.14□□□□□ -0.31
COMMD4-210ENST00000564587 CADP27708 2225 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 IGKV1D-8A0A087WSZ0 117 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-210ENST00000564587 SPRY3O43610 288 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 SEC61A1P61619 476 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms