RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 NCOR1P1Q9H4R4 102 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 LIN7BQ9HAP6 207 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 AASSQ9UDR5 926 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 MYRFQ9Y2G1 1151 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 GMPPBQ9Y5P6 360 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 PLXNB1O43157 2135 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 ODAMA1E959 279 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 TMEM212A6NML5 194 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 SLC33A1O00400 549 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 SULT1B1O43704 296 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 ZFPL1O95159 310 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 CGB3P0DN86 165 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 CGB7P0DN87 165 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 AESQ08117 197 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 CDK5R1Q15078 307 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 KISS1Q15726 138 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 PRAMEF5Q5TYX0 476 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 LHFPL3Q86UP9 236 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 Q8NFD4 153 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 PXT1Q8NFP0 134 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 OR4F17Q8NGA8 305 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 CREB3L1Q96BA8 519 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 COQ2Q96H96 371 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 OR4F4Q96R69 305 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 ISG20L2Q9H9L3 353 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 ERVK13-1Q9NX77 482 aa13.79□□□□□ -0.2
VPS9D1-203ENST00000563798 LEUTXA8MZ59 168 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 LY6LH3BQJ8 138 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 CCDC159P0C7I6 412 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF44P15621 663 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 BRS3P32247 399 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 GDNFP39905 211 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 MTNR1BP49286 362 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 CD83Q01151 205 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 PAX5Q02548 391 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 BAIAP2L2Q6UXY1 529 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 AKR1E2Q96JD6 320 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 MMP28Q9H239 520 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 LINC00574Q9H8X3 128 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 OR6C3Q9NZP0 311 aa13.78□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF729A6NN14 1252 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 OOSP1A8MZH6 123 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 E9PI62 339 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 DEGS1O15121 323 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 TMEM225BP0DP42 221 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 PTGFRP43088 359 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 VDAC2P45880 294 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 ARHGDIBP52566 201 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 HLA-DRB5Q30154 266 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 NSUN5P1Q3KNT7 163 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 FBLN7Q53RD9 439 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 KRBOX4Q5JUW0 171 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 ZNF691Q5VV52 312 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 LYG1Q8N1E2 194 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 OR51T1Q8NGJ9 327 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 OR5AK2Q8NH90 309 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 ZNF286AQ9HBT8 521 aa13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-203ENST00000563798 KBTBD11-OT1A0A1B0GTJ5 212 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 LOC100130705A0A1B0GUX0 176 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 BUB1B-PAK6H3BSN5 160 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 PEX14O75381 377 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 HCKP08631 526 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 CEACAM3P40198 252 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 GBX2P52951 348 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 PRRX1P54821 245 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 ASCL4Q6XD76 172 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 WFDC9Q8NEX5 89 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 OR4D6Q8NGJ1 314 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 OR52I1Q8NGK6 324 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 R3HDM4Q96D70 268 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 CPNE2Q96FN4 548 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 SLC29A1Q99808 456 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 DHDHQ9UQ10 334 aa13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 RPL36Q9Y3U8 105 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-203ENST00000563798 OR2F2O95006 317 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 AMY1AP04745 511 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 AMY2AP04746 511 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 SCN1BQ07699 218 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 IL13RA2Q14627 380 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 TMEM95Q3KNT9 176 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 KLHL22Q53GT1 634 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 OR5AU1Q8NGC0 362 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 APH1BQ8WW43 257 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 STMN2Q93045 179 aa13.75□□□□□ -0.21
VPS9D1-203ENST00000563798 OR5M11Q96RB7 305 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms