RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PSIP1O75475 530 aaKnown RBP1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 CBR3O75828 277 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 CDK14O94921 469 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ATP6V1G2O95670 118 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ASS1P00966 412 aaKnown RBP1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 CISD3P0C7P0 127 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF286BP0CG31 522 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 LIMS3P0CW19 117 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 LIMS4P0CW20 117 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 SPNP16150 400 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 S100A1P23297 94 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 TSPOP30536 169 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 HOXA6P31267 233 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 GCLMP48507 274 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 TTPAP49638 278 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 POLR2GP62487 172 aaKnown RBP eCLIP1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 HBG1P69891 147 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 HBG2P69892 147 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 S100A12P80511 92 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ATP5G2Q06055 141 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 FADDQ13158 208 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 SLAMF1Q13291 335 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ELOCQ15369 112 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 UAP1Q16222 522 aaPredicted RBP1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 MOGQ16653 247 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 XKRXQ6PP77 449 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 FAM131AQ6UXB0 335 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 FA2HQ7L5A8 372 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM105Q8N8V8 129 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ZDHHC22Q8N966 263 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 LZICQ8WZA0 190 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 CCL17Q92583 94 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC35B4Q969S0 331 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF649Q9BS31 505 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 CHCHD7Q9BUK0 85 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 DRC3Q9H069 523 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 MFSD1Q9H3U5 465 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ZSCAN16Q9H4T2 348 aaPredicted RBP1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 LINC00574Q9H8X3 128 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 PARVBQ9HBI1 364 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 PARP11Q9NR21 331 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 DIABLOQ9NR28 239 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 OPN4Q9UHM6 478 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 USH1CQ9Y6N9 552 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 SCRIBQ14160 1630 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TICRRQ7Z2Z1 1910 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ADCY9O60503 1353 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ROCK2O75116 1388 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 A0A1W2PRG6 482 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 OR5K4A6NMS3 321 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 A8MWL6 223 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 PRAMEF26H0Y7S4 382 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CLDN34H7C241 214 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 J3QLI3 93 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 LGALS9O00182 355 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 UBDO15205 165 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TRAPPC3O43617 180 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 NRASP01111 189 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 HRASP01112 189 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 KRASP01116 189 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 IFNA14P01570 189 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CD74P04233 296 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CFL1P23528 166 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ALDH3A1P30838 453 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CRATP43155 626 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 LINC00315P59091 139 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 RHOAP61586 193 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 STX5Q13190 355 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CCDC153Q494R4 210 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF404Q494X3 552 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 Q499Y3 187 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM31Q5JXX7 168 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF678Q5SXM1 525 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 MED27Q6P2C8 311 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 DGAT2L6Q6ZPD8 337 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 DAZ4Q86SG3 579 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 H1FOOQ8IZA3 346 aaPredicted RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 BLIDQ8IZY5 108 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 MIR7-3HGQ8N6C7 128 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 C2orf15Q8WU43 125 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 RNF157Q96PX1 679 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 CGREF1Q99674 301 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF251Q9BRH9 671 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 FAAP24Q9BTP7 215 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 DHX35Q9H5Z1 703 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TRIM45Q9H8W5 580 aaPredicted RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 ASCL3Q9NQ33 180 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 DAZ1Q9NQZ3 744 aaKnown RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 PAQR5Q9NXK6 330 aaPredicted RBP1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 IL37Q9NZH6 218 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TIMM22Q9Y584 194 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 FADS3Q9Y5Q0 445 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 SCN4AP35499 1836 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 TTC21AQ8NDW8 1320 aa1.91□□□□□ -2.1
SHCBP1-202ENST00000563219 BRWD3Q6RI45 1802 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 KIAA1671Q9BY89 1806 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 IGKV2-28A0A075B6P5 120 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 OR6C70A6NIJ9 312 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 EFCAB9A8MZ26 197 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms