RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SYS1Q8N2H4 156 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 CBR4Q8N4T8 237 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 OR5D14Q8NGL3 314 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 ALG8Q9BVK2 526 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 ISG20L2Q9H9L3 353 aaKnown RBP12.99□□□□□ -0.33
SNX1-213ENST00000561026 ODAMA1E959 279 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 SLC33A1O00400 549 aaPredicted RBP12.98□□□□□ -0.33
SNX1-213ENST00000561026 ZFPL1O95159 310 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 PRB2P02812 416 aaPredicted RBP12.98□□□□□ -0.33
SNX1-213ENST00000561026 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
SNX1-213ENST00000561026 TMEM225BP0DP42 221 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 DBTP11182 482 aaKnown RBP12.98□□□□□ -0.33
SNX1-213ENST00000561026 CD24P25063 80 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 CD34P28906 385 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 BRS3P32247 399 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 GDNFP39905 211 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 ZP1P60852 638 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 KISS1Q15726 138 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 OXLD1Q5BKU9 147 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 KRBOX4Q5JUW0 171 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 SERPINA12Q8IW75 414 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 PARP16Q8N5Y8 322 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 STMN2Q93045 179 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 COQ2Q96H96 371 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 ZNF649Q9BS31 505 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 LIN7BQ9HAP6 207 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 MYRFQ9Y2G1 1151 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
SNX1-213ENST00000561026 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 TMEM212A6NML5 194 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 E9PI62 339 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 DEGS1O15121 323 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 SULT1B1O43704 296 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
SNX1-213ENST00000561026 HCKP08631 526 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 PTGFRP43088 359 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 ARHGDIBP52566 201 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 REC114Q7Z4M0 266 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 OR5AU1Q8NGC0 362 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 CREB3L1Q96BA8 519 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 ZNF286AQ9HBT8 521 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 INPP5EQ9NRR6 644 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 ERVK13-1Q9NX77 482 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 ING3Q9NXR8 418 aa12.97□□□□□ -0.33
SNX1-213ENST00000561026 A0A087X0M5 115 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 A0A1B0GX30 115 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 MPZL2O60487 215 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 CEACAM3P40198 252 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 CD83Q01151 205 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 RAB40BQ12829 278 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 MRPL28Q13084 256 aaKnown RBP12.96□□□□□ -0.33
SNX1-213ENST00000561026 Q6ZPA2 131 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 OR5AK2Q8NH90 309 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 Q96MT0 163 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 PDCD1LG2Q9BQ51 273 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 AMBNQ9NP70 447 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 OR6C3Q9NZP0 311 aa12.96□□□□□ -0.33
SNX1-213ENST00000561026 KBTBD11-OT1A0A1B0GTJ5 212 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
SNX1-213ENST00000561026 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 TOR1AO14656 332 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 MTNR1BP49286 362 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 PRRX1P54821 245 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
SNX1-213ENST00000561026 C17orf58Q2M2W7 97 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 UTF1Q5T230 341 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
SNX1-213ENST00000561026 CAPSLQ8WWF8 208 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 RBM14Q96PK6 669 aaKnown RBP12.95□□□□□ -0.34
SNX1-213ENST00000561026 DHDHQ9UQ10 334 aa12.95□□□□□ -0.34
SNX1-213ENST00000561026 H0YJX3 145 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 OR2F2O95006 317 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 CCDC159P0C7I6 412 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 CGB3P0DN86 165 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 CGB7P0DN87 165 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 ZNF529Q6P280 563 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 SLC29A1Q99808 456 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 SLC25A33Q9BSK2 321 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 C9orf16Q9BUW7 83 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms