RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CEACAM16Q2WEN9 425 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF404Q494X3 552 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ACTL10Q5JWF8 245 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 RESP18Q5W5W9 173 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 CLEC18BQ6UXF7 455 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 FA2HQ7L5A8 372 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 FAM19A1Q7Z5A9 133 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 PRNTQ86SH4 94 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 SELENOHQ8IZQ5 122 aaKnown RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ZFP62Q8NB50 900 aaPredicted RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ACTL9Q8TC94 416 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 IFT81Q8WYA0 676 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 GTF2H4Q92759 462 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TNFRSF14Q92956 283 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 PPP1R36Q96LQ0 422 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 CATSPER2Q96P56 530 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 OR2A7Q96R45 310 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 VAT1Q99536 393 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 MED10Q9BTT4 135 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 THTPAQ9BU02 230 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 BBS2Q9BXC9 721 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ASB7Q9H672 318 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 PLEKHA1Q9HB21 404 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TMBIM4Q9HC24 238 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 OR2S2Q9NQN1 319 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 SDHAF3Q9NRP4 125 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TAC3Q9UHF0 121 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 MRM2Q9UI43 246 aaKnown RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ENPP5Q9UJA9 477 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 SPATA31E1Q6ZUB1 1445 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 YLPM1P49750 1951 aaKnown RBP1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SORL1Q92673 2214 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 LOC389332A0A1B0GUA5 103 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 GOLGA8IPA6NC78 632 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 F8VP50 259 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 K7EPK0 472 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CALUO43852 315 aaPredicted RBP1.28□□□□□ -2.2
VPS13C-207ENST00000558919 DHRS3O75911 302 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CXorf1O96002 111 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 RLN2P04090 185 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CDK1P06493 297 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SYT1P21579 422 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 PMS2P3Q13401 168 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 COTL1Q14019 142 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 GUSBP1Q15486 140 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SSX1Q16384 188 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 Q499Y3 187 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 HSP90B2PQ58FF3 399 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CLEC6AQ6EIG7 209 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 AHSA2Q719I0 299 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CYP4Z1Q86W10 505 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SPATA24Q86W54 205 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 LRRC6Q86X45 466 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 ATPAF2Q8N5M1 289 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 CDRT4Q8N9R6 151 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 MNS1Q8NEH6 495 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 OR8G5Q8NG78 346 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 ITLN2Q8WWU7 325 aaPredicted RBP1.28□□□□□ -2.2
VPS13C-207ENST00000558919 LRRC45Q96CN5 670 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 IGF2BP2-AS1Q96M15 143 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF75AQ96N20 296 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF396Q96N95 335 aaPredicted RBP1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SERPINB11Q96P15 392 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 NXF2Q9GZY0 626 aaKnown RBP1.28□□□□□ -2.2
VPS13C-207ENST00000558919 TMEM38BQ9NVV0 291 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 DNAJC27Q9NZQ0 273 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF780BQ9Y6R6 833 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 SSH2Q76I76 1423 aa1.28□□□□□ -2.2
VPS13C-207ENST00000558919 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.21
VPS13C-207ENST00000558919 EIF4G1Q04637 1599 aaKnown RBP1.27□□□□□ -2.21
VPS13C-207ENST00000558919 NOS1P29475 1434 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 LRPPRCP42704 1394 aaKnown RBP1.27□□□□□ -2.21
VPS13C-207ENST00000558919 NRCAMQ92823 1304 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 CD300LBA8K4G0 201 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 IGLL5B9A064 214 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 SULT1C2O00338 296 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 PLPP3O14495 311 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 GYG2O15488 501 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 COX7A2P2O60397 106 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 CDK14O94921 469 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 TNFAIP8O95379 198 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 CECR9P0C854 216 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 PTHLHP12272 177 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 IMPA1P29218 277 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 ANP32AP39687 249 aaKnown RBP1.27□□□□□ -2.21
VPS13C-207ENST00000558919 CRATP43155 626 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 TTPAP49638 278 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 XKP51811 444 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 RAB38P57729 211 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 OR2B6P58173 313 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 SKP1P63208 163 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 BNIP2Q12982 314 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 FLOT2Q14254 428 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 OR4D1Q15615 310 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 TRAM1Q15629 374 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 HBMQ6B0K9 141 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 TMPPEQ6ZT21 453 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 PAGE2Q7Z2X7 111 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 LINC00596Q86U02 117 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms