RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SMARCD3Q6STE5 483 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 Q6ZSR6 202 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 COMMD7Q86VX2 200 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SNX29P2Q8IUI4 249 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CRLF3Q8IUI8 442 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF547Q8IVP9 402 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZBTB8OSQ8IWT0 167 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC22A18ASQ8N1D0 253 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ST6GALNAC3Q8NDV1 305 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PLPP5Q8NEB5 264 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 LFNGQ8NES3 379 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CASTOR1Q8WTX7 329 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PIH1D2Q8WWB5 315 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 BAALCQ8WXS3 180 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR5P2Q8WZ92 322 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RPUSD4Q96CM3 377 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DNAJC19Q96DA6 116 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 GPR82Q96P67 336 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MBOAT4Q96T53 435 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 C20orf24Q9BUV8 137 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TM2D1Q9BX74 207 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ACTR3CQ9C0K3 210 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ING2Q9H160 280 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 NXF5Q9H1B4 397 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CST9LQ9H4G1 147 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ELOVL3Q9HB03 270 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM138Q9NPI0 162 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ESM1Q9NQ30 184 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZC4H2Q9NQZ6 224 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CHRAC1Q9NRG0 131 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PAK1IP1Q9NWT1 392 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MED29Q9NX70 200 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SPRR3Q9UBC9 169 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ERG28Q9UKR5 140 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ST3GAL6Q9Y274 331 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FARSAQ9Y285 508 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PRG3Q9Y2Y8 225 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SETBP1Q9Y6X0 1596 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CFTRP13569 1480 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 C1orf167Q5SNV9 1468 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ANK1P16157 1881 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TRAV39A0A0B4J263 110 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 H3BNH8 94 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 I3L521 148 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 J3QRK9 145 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MANBAO00462 879 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR7A17O14581 309 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MSH4O15457 936 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ORC5O43913 435 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 UPK1BO75841 260 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ATG12O94817 140 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SUPT7LO94864 414 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 S1PR2O95136 353 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR8U9P0C7N5 309 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HSD17B1P14061 328 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SDC1P18827 310 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ALOX5APP20292 161 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HMGB2P26583 209 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TMBIM6P55061 237 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 KRTAP10-7P60409 375 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 BAXQ07812 192 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RAB40BQ12829 278 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MAD2L1BPQ15013 274 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SYPL1Q16563 259 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TIGITQ495A1 244 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MESTQ5EB52 335 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ACTL10Q5JWF8 245 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ANKRD22Q5VYY1 191 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 NXNL2Q5VZ03 156 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TRIQKQ629K1 86 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 STEAP4Q687X5 459 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FBXL22Q6P050 247 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 WDR74Q6RFH5 385 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PLET1Q6UQ28 207 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TOMM20LQ6UXN7 152 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 C19orf35Q6ZS72 473 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM183BPQ6ZVS7 135 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 COX15Q7KZN9 410 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 NEGR1Q7Z3B1 354 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR2W3Q7Z3T1 314 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DOLPP1Q86YN1 238 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OSR2Q8N2R0 312 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR51G2Q8NGK0 314 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM151AQ8WW52 585 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DEDD2Q8WXF8 326 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FCGR1BQ92637 280 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZFP3Q96NJ6 502 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RNF157Q96PX1 679 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 C20orf85Q9H1P6 137 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DSN1Q9H410 356 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 BEX1Q9HBH7 125 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PRODH2Q9UF12 536 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 LGALS13Q9UHV8 139 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF107Q9UII5 783 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PDE10AQ9Y233 779 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HS3ST2Q9Y278 367 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RNF11Q9Y3C5 154 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 UFC1Q9Y3C8 167 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MROH2BQ7Z745 1585 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CCDC88AQ3V6T2 1871 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms