RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CD83Q01151 205 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 KIR2DS1Q14954 304 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 MPPED2Q15777 294 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 SMIM21Q3B7S5 101 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
SHMT2-233ENST00000557529 ACP7Q6ZNF0 438 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF826PQ6ZT77 177 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 TMED4Q7Z7H5 227 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 SLC25A42Q86VD7 318 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 LHFPL1Q86WI0 220 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 FAM90A1Q86YD7 464 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 GALNT11Q8NCW6 608 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 RANGRFQ9HD47 186 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-233ENST00000557529 Q9N2K0 584 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 VSIG4Q9Y279 399 aa10.55□□□□□ -0.72
SHMT2-233ENST00000557529 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
SHMT2-233ENST00000557529 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-233ENST00000557529 HS3ST1O14792 307 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 SPRY3O43610 288 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 CD3EP07766 207 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ADH4P08319 380 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 OR4A8P0C604 315 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 OR4E1P0C645 316 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 OR5H8P0DN80 308 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ANXA3P12429 323 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 UBE2MP61081 183 aaKnown RBP10.54□□□□□ -0.72
SHMT2-233ENST00000557529 TNFAIP6P98066 277 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ADIPOQQ15848 244 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 BEX5Q5H9J7 111 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 PRR7Q8TB68 274 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF431Q8TF32 576 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-233ENST00000557529 LRRC29Q8WV35 223 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 RDH5Q92781 318 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 ERGIC1Q969X5 290 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 MRGPRFQ96AM1 343 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 OR2V2Q96R30 315 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 IL19Q9UHD0 177 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 MGAT4AQ9UM21 535 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 PKD1L2Q7Z442 2459 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 PCNX1Q96RV3 2341 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 CADP27708 2225 aa10.54□□□□□ -0.72
SHMT2-233ENST00000557529 TRDCB7Z8K6 153 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 IFNL4K9M1U5 179 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 SIRPB1O00241 398 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 SLC33A1O00400 549 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 HSPB6O14558 160 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 IGHV1-46P01743 117 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 CTXN2P0C2S0 81 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 LMO1P25800 156 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 GLP1RP43220 463 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 NPY4RP50391 375 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 GMFBP60983 142 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 C4orf17Q53FE4 359 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ADAM5Q6NVV9 412 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 DHRS11Q6UWP2 260 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 PEG10Q86TG7 708 aaKnown RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 OR11H7Q8NGC8 314 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ITLN1Q8WWA0 313 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 PLPPR2Q96GM1 343 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 FYTTD1Q96QD9 318 aaKnown RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 DHRS9Q9BPW9 319 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 TRAF4Q9BUZ4 470 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF222Q9UK12 451 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 GPR132Q9UNW8 380 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 ESPL1Q14674 2120 aa10.53□□□□□ -0.72
SHMT2-233ENST00000557529 MEIKINA0A087WXM9 373 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 TUBAL3A6NHL2 446 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 SRRM5B3KS81 715 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 SHISA9B4DS77 424 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 CD55P08174 381 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 SERPINF1P36955 418 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 KCNJ3P48549 501 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF660Q6AZW8 331 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF880Q6PDB4 577 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 LYG2Q86SG7 212 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 MOGAT3Q86VF5 341 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 MUC20Q8N307 709 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-233ENST00000557529 ZNF808Q8N4W9 903 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-233ENST00000557529 TMEM185AQ8NFB2 350 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 LINC01560Q8TB33 94 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 MRPL30Q8TCC3 161 aaKnown RBP10.52□□□□□ -0.72
SHMT2-233ENST00000557529 CAPSLQ8WWF8 208 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 DMRTB1Q96MA1 342 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 TMEM165Q9HC07 324 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 MGAT4CQ9UBM8 478 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 OR14J1Q9UGF5 321 aa10.52□□□□□ -0.72
SHMT2-233ENST00000557529 TPRP12270 2363 aaKnown RBP10.52□□□□□ -0.72
SHMT2-233ENST00000557529 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 OR5H14A6NHG9 310 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 WNT9BO14905 357 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms