RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 RBBP9O75884 186 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 TPPPO94811 219 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 KNG1P01042 644 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A15PP0C7V4 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A13PP0C7W8 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A14PP0C7W9 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A24PP0C7X0 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RCVRNP35243 200 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 INPP1P49441 399 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 MRPS10P82664 201 aaKnown RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 SPIN3Q5JUX0 258 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 AKAP14Q86UN6 197 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 ZNF295-AS1Q8N0V1 137 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 MAFIPQ8WZ33 124 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 CHST6Q9GZX3 395 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 LIME1Q9H400 295 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RASL12Q9NYN1 266 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RCC2Q9P258 522 aaKnown RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 WIPI2Q9Y4P8 454 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 USP9YO00507 2555 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 CRYBG3Q68DQ2 2970 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 LRRC30A6NM36 301 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 SERPINE3A8MV23 424 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 TMEM178BH3BS89 294 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 H7C417 338 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 SLC33A1O00400 549 aaPredicted RBP8.55□□□□□ -1.04
SRP54-208ENST00000555557 PLA2G10O15496 165 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 GOSR1O95249 250 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 LPLP06858 475 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 PRDX2P32119 198 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 GABRA2P47869 451 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 COL10A1Q03692 680 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 HIST2H2BCQ6DN03 193 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 FIP1L1Q6UN15 594 aaKnown RBP8.55□□□□□ -1.04
SRP54-208ENST00000555557 LINC00596Q86U02 117 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A1Q86YD7 464 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 POC5Q8NA72 575 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 OR4S1Q8NGB4 309 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 NEK7Q8TDX7 302 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 NRGNQ92686 78 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 CMSS1Q9BQ75 279 aaKnown RBP8.55□□□□□ -1.04
SRP54-208ENST00000555557 ST6GALNAC5Q9BVH7 336 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 DPCDQ9BVM2 203 aaPredicted RBP8.55□□□□□ -1.04
SRP54-208ENST00000555557 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRP54-208ENST00000555557 MTFP1Q9UDX5 166 aa8.55□□□□□ -1.04
SRP54-208ENST00000555557 A0A1B0GW55 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 MCRIP1C9JLW8 97 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 SULT1C2O00338 296 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 SSX4O60224 188 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 GYPAP02724 150 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 AMY2BP19961 511 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PNLIPRP3Q17RR3 467 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 MICBQ29980 383 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 HFEQ30201 348 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PAN3Q58A45 887 aaKnown RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 OR52W1Q6IF63 320 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 FAAP20Q6NZ36 180 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 ANGPTL6Q8NI99 470 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 CAPSLQ8WWF8 208 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PPA2Q9H2U2 334 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 ZNF701Q9NV72 531 aaPredicted RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 GLS2Q9UI32 602 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 FAM172BPA6NC97 362 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 OOEPA6NGQ2 149 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 SELLP14151 372 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 HLA-DMAP28067 261 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 IFITM2Q01629 132 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 KLF9Q13886 244 aaPredicted RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 ATXN7L3Q14CW9 347 aaPredicted RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 Q6ZPA2 131 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 C5orf24Q7Z6I8 188 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 C1orf87Q8N0U7 546 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 ASCC1Q8N9N2 400 aaKnown RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 ZNRF1Q8ND25 227 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 C11orf54Q9H0W9 315 aaPredicted RBP8.54□□□□□ -1.04
SRP54-208ENST00000555557 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 SPACA1Q9HBV2 294 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 PPIAL4AQ9Y536 164 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 DSCAMO60469 2012 aa8.54□□□□□ -1.04
SRP54-208ENST00000555557 CSMD2Q7Z408 3487 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms