RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HACD4Q5VWC8 232 aa9□□□□□ -0.97
TDP1-211ENST00000555178 TRIQKQ629K1 86 aa9□□□□□ -0.97
TDP1-211ENST00000555178 OR4S1Q8NGB4 309 aa9□□□□□ -0.97
TDP1-211ENST00000555178 GPX8Q8TED1 209 aa9□□□□□ -0.97
TDP1-211ENST00000555178 ZFAND2BQ8WV99 257 aa9□□□□□ -0.97
TDP1-211ENST00000555178 NUDT16L1Q9BRJ7 211 aaKnown RBP9□□□□□ -0.97
TDP1-211ENST00000555178 WIPI2Q9Y4P8 454 aa9□□□□□ -0.97
TDP1-211ENST00000555178 NPTNQ9Y639 398 aa9□□□□□ -0.97
TDP1-211ENST00000555178 MEX3AA1L020 520 aaKnown RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 DEGS1O15121 323 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 GSTZ1O43708 216 aaPredicted RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 SCGNO76038 276 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 GYPAP02724 150 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 MELTFP08582 738 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 IRF2P14316 349 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 FUT3P21217 361 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 RANBP1P43487 201 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 GNG2P59768 71 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 COL10A1Q03692 680 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ATXN7L3Q14CW9 347 aaPredicted RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 OR52W1Q6IF63 320 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 DNM1P46Q6ZS02 220 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 OR11L1Q8NGX0 322 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 FCAMRQ8WWV6 532 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ERGIC1Q969X5 290 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 DPCDQ9BVM2 203 aaPredicted RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 NARFLQ9H6Q4 476 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ZNF701Q9NV72 531 aaPredicted RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 CR1P17927 2039 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 IGKV1D-8A0A087WSZ0 117 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 TRAV39A0A0B4J263 110 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 TMEM82A0PJX8 343 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 VGLL3A8MV65 326 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 PLA2G10O15496 165 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 KNG1P01042 644 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 LPLP06858 475 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 GSTP1P09211 210 aaKnown RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 GABRA2P47869 451 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 EFNA4P52798 201 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ARFRP1Q13795 201 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ZNF181Q2M3W8 571 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 SPIN3Q5JUX0 258 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 ZNRF1Q8ND25 227 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 PLPPR1Q8TBJ4 325 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 RHOFQ9HBH0 211 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 ZNF222Q9UK12 451 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 HSF4Q9ULV5 492 aa8.99□□□□□ -0.97
TDP1-211ENST00000555178 RBMX2Q9Y388 322 aaKnown RBP8.99□□□□□ -0.97
TDP1-211ENST00000555178 MYO9AB2RTY4 2548 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 MALRD1Q5VYJ5 2156 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 TEX15Q9BXT5 2789 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A10PA6NDY2 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A18PA6NE21 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A16PA6NEW6 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 OOEPA6NGQ2 149 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A20PA6NIJ5 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A8PA6NJQ4 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A7PA6NKC0 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 CYSRT1A8MQ03 144 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A22PA8MWA6 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A12PA8MX19 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A5PA8MXJ8 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A23PA8MXZ1 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A15PP0C7V4 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A13PP0C7W8 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A14PP0C7W9 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A24PP0C7X0 464 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 PRDX2P32119 198 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 ATP5J2P56134 94 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 PAN3Q58A45 887 aaKnown RBP8.98□□□□□ -0.97
TDP1-211ENST00000555178 STUMQ69YW2 141 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 C17orf107Q6ZR85 190 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 FAM216BQ8N7L0 139 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 TPRX1Q8N7U7 411 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 ASCC1Q8N9N2 400 aaKnown RBP8.98□□□□□ -0.97
TDP1-211ENST00000555178 OR4D10Q8NGI6 311 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 ANGPTL6Q8NI99 470 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 NEU4Q8WWR8 484 aaPredicted RBP8.98□□□□□ -0.97
TDP1-211ENST00000555178 SNAPC3Q92966 411 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 LURAP1Q96LR2 239 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 TMEM165Q9HC07 324 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-211ENST00000555178 MTFP1Q9UDX5 166 aa8.98□□□□□ -0.97
TDP1-211ENST00000555178 LRRC30A6NM36 301 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 SERPINE3A8MV23 424 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 SH2D1BO14796 132 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 TNFRSF13BO14836 293 aaPredicted RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 KLF9Q13886 244 aaPredicted RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 FAM189A2Q15884 450 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 MICBQ29980 383 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 HFEQ30201 348 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 FIP1L1Q6UN15 594 aaKnown RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 LINC00596Q86U02 117 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 GLCCI1Q86VQ1 547 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 HPS1Q92902 700 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 CCL13Q99616 98 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 CMSS1Q9BQ75 279 aaKnown RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 ST6GALNAC5Q9BVH7 336 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms