RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GIMAP1Q8WWP7 306 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MED30Q96HR3 178 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MEGF10Q96KG7 1140 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MED28Q9H204 178 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MCUBQ9NWR8 336 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 PIGLQ9Y2B2 252 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 NOP16Q9Y3C1 178 aaKnown RBP10.42□□□□□ -0.74
SHMT2-214ENST00000554604 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 J3QLI3 93 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 MLNRO43193 412 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 FOXH1O75593 365 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 IL5P05113 134 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 GTF2F2P13984 249 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 FAHP16930 419 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 RCVRNP35243 200 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 OR3A4PP47883 348 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 CD83Q01151 205 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 RIPPLY1Q0D2K3 151 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 MAB21L1Q13394 359 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 ZMYND11Q15326 602 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 RBMS2Q15434 407 aaKnown RBP10.41□□□□□ -0.74
SHMT2-214ENST00000554604 OR8G1Q15617 311 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 KISS1Q15726 138 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 UBE2V2Q15819 145 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 ZBTB37Q5TC79 503 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 METTL11BQ5VVY1 283 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 STEAP1BQ6NZ63 245 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 Q6ZTK2 550 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 NOXA1Q86UR1 476 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 MOGAT3Q86VF5 341 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 C1orf87Q8N0U7 546 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 MUC20Q8N307 709 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-214ENST00000554604 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 OR2AE1Q8NHA4 323 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 SPSB1Q96BD6 273 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-214ENST00000554604 RNF170Q96K19 258 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 GPER1Q99527 375 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 URM1Q9BTM9 101 aaKnown RBP10.41□□□□□ -0.74
SHMT2-214ENST00000554604 LPAR5Q9H1C0 372 aa10.41□□□□□ -0.74
SHMT2-214ENST00000554604 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CD300LBA8K4G0 201 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CYB5R3P00387 301 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 C1QBP02746 253 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CD74P04233 296 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 IRF2P14316 349 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 PRKACBP22694 351 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 PTGFRP43088 359 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 ZNF92Q03936 586 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CNN3Q15417 329 aaKnown RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 FCN2Q15485 313 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 ESCO2Q56NI9 601 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM42Q69YG0 159 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CRIP3Q6Q6R5 217 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 SPSB4Q96A44 273 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 SPACA5Q96QH8 159 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 C19orf24Q9BVV8 132 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM59Q9BXS4 323 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 CST11Q9H112 138 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 C7orf69Q9H7B7 122 aa10.4□□□□□ -0.74
SHMT2-214ENST00000554604 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
SHMT2-214ENST00000554604 hCG_38984A0A1B0GV85 526 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 MEIS3P1A6NDR6 274 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 SNRPGP15A8MWD9 76 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF205O95201 554 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 RAB3DO95716 219 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 MPIG6BO95866 241 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 CYB5AP00167 134 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 AVPP01185 164 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 EPHA1P21709 976 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 CA6P23280 308 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ACKR3P25106 362 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 ERP29P30040 261 aaKnown RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 VEGFCP49767 419 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 RPS27AP62979 156 aaKnown RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 MEF2DQ14814 521 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 OR8B8Q15620 311 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 PNLIPRP3Q17RR3 467 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 CLVS2Q5SYC1 327 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
SHMT2-214ENST00000554604 GLDNQ6ZMI3 551 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-214ENST00000554604 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms