RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 OR52E4Q8NGH9 312 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR4C13Q8NGP0 309 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ZNF420Q8TAQ5 688 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 HAVCR2Q8TDQ0 301 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 SLC37A2Q8TED4 501 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ABHD3Q8WU67 409 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 AP3S1Q92572 193 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 PTX4Q96A99 478 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 LRRC58Q96CX6 371 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR10C1Q96KK4 312 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 BMFQ96LC9 184 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR2M2Q96R28 347 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR2A7Q96R45 310 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR4K3Q96R72 315 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 POMPQ9Y244 141 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 BTRCQ9Y297 605 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 TP53TG1Q9Y2A0 90 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 LSM5Q9Y4Y9 91 aaKnown RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 TNRQ92752 1358 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ABCC11Q96J66 1382 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 MAP3K5Q99683 1374 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 TRAV8-3A0A0A6YYJ7 113 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 FAM168BA1KXE4 195 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PLAC8L1A1L4L8 177 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 A6NDX4 124 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 FAM183AA6NL82 134 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 KRBOX1C9JBD0 128 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 H0YJX3 145 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 DNASE2O00115 360 aaPredicted RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 LAD1O00515 517 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 RGS5O15539 181 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 DENRO43583 198 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 PDCD6O75340 191 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CYB5R3P00387 301 aaPredicted RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 REG1AP05451 166 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 MRPL3P09001 348 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 ZNF806P0C7X5 589 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 LINC00614P0C842 121 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 GABRA1P14867 456 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CRISP2P16562 243 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CXCL2P19875 107 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CXCL3P19876 107 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PRTN3P24158 256 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 MSNP26038 577 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 PRSS3P35030 304 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 REG1BP48304 166 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 SULT1A1P50225 295 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 GFERP55789 205 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 TAS2R43P59537 309 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 KRTAP10-10P60014 251 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 SPCS3P61009 180 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ERVS71-1P61550 626 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PPP1CAP62136 330 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ARF6P62330 175 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 RANP62826 216 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 SARNPP82979 210 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 PPIDQ08752 370 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 SKP2Q13309 424 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PNOCQ13519 176 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 FAM53BQ14153 422 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 MAPK14Q16539 360 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 LRRC75BQ2VPJ9 315 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 Q499Y3 187 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 MPV17L2Q567V2 206 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CENPWQ5EE01 88 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ZNF684Q5T5D7 378 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 SAXO2Q658L1 398 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 LINC00596Q86U02 117 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PDPNQ86YL7 162 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CALHM1Q8IU99 346 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 Q8N9W7 124 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 SUMF2Q8NBJ7 301 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 OR1P1Q8NH06 330 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 C16orf78Q8WTQ4 265 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ASB17Q8WXJ9 295 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ASB13Q8WXK3 278 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 CCL17Q92583 94 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 NEURL3Q96EH8 262 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 IMP4Q96G21 291 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 MRPL48Q96GC5 212 aaKnown RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 OR52B2Q96RD2 323 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 SLC25A39Q9BZJ4 359 aaPredicted RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 TBL1XR1Q9BZK7 514 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 TSGA10Q9BZW7 698 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ZNF436Q9C0F3 470 aaPredicted RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 CHST5Q9GZS9 411 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 OR51I1Q9H343 314 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 XPNPEP1Q9NQW7 623 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PARVAQ9NVD7 372 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 IL37Q9NZH6 218 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 RBM12B-AS1Q9P1G2 102 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 VPS29Q9UBQ0 182 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 GLS2Q9UI32 602 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ZNF225Q9UK10 706 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 DKKL1Q9UK85 242 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 PSG11Q9UQ72 335 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 ZNF706Q9Y5V0 76 aaPredicted RBP1.57□□□□□ -2.16
SRP54-204ENST00000553923 NRCAMQ92823 1304 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 UNC13AQ9UPW8 1703 aa1.57□□□□□ -2.16
SRP54-204ENST00000553923 LOC102724200A0A096LPH7 203 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms