RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MUC15Q8N387 334 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF786Q8N393 782 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 CYB561D1Q8N8Q1 229 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 PIGXQ8TBF5 258 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 TWIST2Q8WVJ9 160 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 LINC01587Q99440 93 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 TMEM208Q9BTX3 173 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
SCFD1-208ENST00000553278 SLC22A4Q9H015 551 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 CA10Q9NS85 328 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 BABAM2Q9NXR7 383 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 TAS2R5Q9NYW4 299 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 IL20Q9NYY1 176 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 IGLV4-69A0A075B6H9 119 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 IGHV2-26A0A0B4J1V2 119 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 CENPVL3A0A0U1RRI6 287 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 METTL15A6NJ78 407 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 F5H5T6 163 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 M0R036 132 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 RBFOX2O43251 390 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ATP5HO75947 161 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ASS1P00966 412 aaKnown RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 IFNA5P01569 189 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 HLA-DQB1P01920 261 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 IMPA1P29218 277 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 IFNGR2P38484 337 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 NKX2-5P52952 324 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 AP2S1P53680 142 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ATP5G2Q06055 141 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 IMPG1Q17R60 797 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 LINC00303Q3SY05 128 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 TTMPQ5BVD1 217 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 NXNL2Q5VZ03 156 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 LPCAT4Q643R3 524 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 GLYATQ6IB77 296 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 NANOGP8Q6NSW7 305 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF773Q6PK81 442 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 OLIG3Q7RTU3 272 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 MTERF4Q7Z6M4 381 aaKnown RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 CPNE9Q8IYJ1 553 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 RIBC1Q8N443 379 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 OR9A2Q8NGT5 310 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ERMNQ8TAM6 284 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 CIRBP-AS1Q8TBR5 109 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 FAM57AQ8TBR7 257 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 PTH2Q96A98 100 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 HRASLSQ9HDD0 168 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 C21orf62Q9NYP8 219 aa3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF223Q9UK11 482 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 COL2A1P02458 1487 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-208ENST00000553278 ABCC11Q96J66 1382 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 LGALS9O00182 355 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF207O43670 478 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 SOD3P08294 240 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 CFL1P23528 166 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 HOXA6P31267 233 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 CD79BP40259 229 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF133P52736 654 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 DYNLL1P63167 89 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 GTF2BQ00403 316 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 FAM53BQ14153 422 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 GNA13Q14344 377 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 PAFAH1B3Q15102 231 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF658BQ4V348 819 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 C8orf74Q6P047 294 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 XKRXQ6PP77 449 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 FA2HQ7L5A8 372 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 C10orf67Q8IYJ2 551 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 SLC25A45Q8N413 288 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 ZDHHC22Q8N966 263 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 CCDC112Q8NEF3 446 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF555Q8NEP9 628 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 OR2Z1Q8NG97 314 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 SLC25A46Q96AG3 418 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 RBMXL1Q96E39 390 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 PACRGQ96M98 296 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 EBPLQ9BY08 206 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 CHST5Q9GZS9 411 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 TAC3Q9UHF0 121 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 C3orf18Q9UK00 162 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 C14orf166Q9Y224 244 aaKnown RBP3.77□□□□□ -1.81
SCFD1-208ENST00000553278 MIA3Q5JRA6 1907 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 PTPRTO14522 1441 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 RIMS2Q9UQ26 1411 aa3.77□□□□□ -1.81
SCFD1-208ENST00000553278 WI2-2373I1.2A0A1W2PRP0 233 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 KLLNB2CW77 178 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 C8orf87E5RJ46 101 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 CXCR6O00574 342 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 RGS5O15539 181 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 EPPINO95925 133 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 CD74P04233 296 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 TYMSP04818 313 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ADRA2AP08913 450 aa3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ZNF7P17097 686 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-208ENST00000553278 NELFEP18615 380 aaKnown RBP3.76□□□□□ -1.81
SCFD1-208ENST00000553278 ADORA1P30542 326 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms