RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CD83Q01151 205 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 TFF3Q07654 80 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 CDK10Q15131 360 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 ZDHHC22Q8N966 263 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 OR11H7Q8NGC8 314 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 CAPSLQ8WWF8 208 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 MYOZ1Q9NP98 299 aaPredicted RBP16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 DIDO1Q9BTC0 2240 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 SLC33A1O00400 549 aaPredicted RBP16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 IGHV1-46P01743 117 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 CFHR2P36980 270 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 UQCRFS1P47985 274 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 GRK1Q15835 563 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 AADACL3Q5VUY0 350 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 ZNF626Q68DY1 528 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 ACP7Q6ZNF0 438 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 Q6ZS49 121 aa16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 FYTTD1Q96QD9 318 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-215ENST00000553186 CFAP46Q8IYW2 2715 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 hCG_1807616A0A1W2PRN6 198 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 EIF2B2P49770 351 aaKnown RBP16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 ARPC4P59998 168 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 SRSF7Q16629 238 aaKnown RBP eCLIP16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 ZNF660Q6AZW8 331 aaPredicted RBP16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 C17orf107Q6ZR85 190 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 TMED4Q7Z7H5 227 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 OR52B4Q8NGK2 314 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 NEK7Q8TDX7 302 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 ICE1Q9Y2F5 2266 aa16.49■□□□□ 0.23
RBFOX1-215ENST00000553186 SH2D1BO14796 132 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 GLRA1P23415 457 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 GATA4P43694 442 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 RBM39Q14498 530 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 TMEM17Q86X19 198 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ITLN1Q8WWA0 313 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 LRRC46Q96FV0 321 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ZNF286AQ9HBT8 521 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 GPN1Q9HCN4 374 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 Q9N2K0 584 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ZDHHC8Q9ULC8 765 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ROS1P08922 2347 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 HIVEP3Q5T1R4 2406 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 HAND1O96004 215 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 CXCL3P19876 107 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 GNLYP22749 145 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 C20orf204Q6ZNR8 217 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 GALNT11Q8NCW6 608 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 MRPL30Q8TCC3 161 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 MARCH1Q8TCQ1 289 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 LRRC29Q8WV35 223 aa16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 CHMP1AQ9HD42 196 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ANKHD1Q8IWZ3 2542 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-215ENST00000553186 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SIRPB1O00241 398 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SSNA1O43805 119 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 CREBL2O60519 120 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 OR4E1P0C645 316 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SULT1A3P0DMM9 295 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SULT1A4P0DMN0 295 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 OR5H8P0DN80 308 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 LMO1P25800 156 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 NPY4RP50391 375 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 C4orf17Q53FE4 359 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 FIP1L1Q6UN15 594 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 OR10Z1Q8NGY1 313 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 LIME1Q9H400 295 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 RIMS4Q9H426 269 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 NECAP2Q9NVZ3 263 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 ZNF69Q9UC07 566 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 IL19Q9UHD0 177 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 TRBV6-6A0A0A6YYG2 114 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 OR5H14A6NHG9 310 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SRRM5B3KS81 715 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 E7EQL1 145 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SIAH2O43255 324 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 GSTT2P0CG29 244 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 EGR1P18146 543 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 CEBPDP49716 269 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 PAN3Q58A45 887 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SHEQ5VZ18 495 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 DHRS11Q6UWP2 260 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 PEG10Q86TG7 708 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 SLC25A42Q86VD7 318 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 MOGAT3Q86VF5 341 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 MUC20Q8N307 709 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 CCDC107Q8WV48 283 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 NEUROG1Q92886 237 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 TMEM165Q9HC07 324 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 TREM2Q9NZC2 230 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 GPR132Q9UNW8 380 aa16.47■□□□□ 0.23
RBFOX1-215ENST00000553186 TUBAL3A6NHL2 446 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 KNG1P01042 644 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 SMIM21Q3B7S5 101 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 C4orf46Q504U0 113 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 TCTE3Q8IZS6 198 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 GCSAMQ8N6F7 178 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 OR14J1Q9UGF5 321 aa16.46■□□□□ 0.23
RBFOX1-215ENST00000553186 PSPNO60542 156 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms