RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 GTF2F2P13984 249 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
TROAP-213ENST00000550709 AESQ08117 197 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 ATXN7L3Q14CW9 347 aaPredicted RBP11.27□□□□□ -0.61
TROAP-213ENST00000550709 PAN3Q58A45 887 aaKnown RBP11.27□□□□□ -0.61
TROAP-213ENST00000550709 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.61
TROAP-213ENST00000550709 CDH26Q8IXH8 852 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 PNKDQ8N490 385 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 Q8NFD4 153 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 OR51T1Q8NGJ9 327 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 DMRTB1Q96MA1 342 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 UQCC2Q9BRT2 126 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 PCDHB16Q9NRJ7 776 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 NDUFB11Q9NX14 153 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 IL36GQ9NZH8 169 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
TROAP-213ENST00000550709 DOCK11Q5JSL3 2073 aa11.27□□□□□ -0.61
TROAP-213ENST00000550709 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 CCRL2O00421 344 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
TROAP-213ENST00000550709 CRTAPO75718 401 aaPredicted RBP11.26□□□□□ -0.61
TROAP-213ENST00000550709 ZNF728P0DKX0 622 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 PRTN3P24158 256 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 COX7A1P24310 79 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 LMO1P25800 156 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 GLIPR1P48060 266 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 P2RX3P56373 397 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 GPR176Q14439 515 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 TAF9Q16594 264 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 KRTAP21-3Q3LHN1 58 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 KRBOX4Q5JUW0 171 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
TROAP-213ENST00000550709 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 TRAPPC6BQ86SZ2 158 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 LYPD6Q86Y78 171 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 TMEM104Q8NE00 496 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
TROAP-213ENST00000550709 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 MDFIQ99750 246 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 SELENOIQ9C0D9 397 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 CUBNO60494 3623 aa11.26□□□□□ -0.61
TROAP-213ENST00000550709 hCG_1809904A0A1W2PP81 198 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 A0A1W2PPE2 198 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 A0A1W2PR64 198 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 A0A1W2PRV1 198 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 DLX6P56179 175 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
TROAP-213ENST00000550709 P2RY14Q15391 338 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 ATAD3CQ5T2N8 411 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 TCF23Q7RTU1 214 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 TNFRSF14Q92956 283 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 FOXRED1Q96CU9 486 aaPredicted RBP11.25□□□□□ -0.61
TROAP-213ENST00000550709 COQ2Q96H96 371 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 C1orf147Q96MC9 270 aaPredicted RBP11.25□□□□□ -0.61
TROAP-213ENST00000550709 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 GFI1Q99684 422 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 KCNK15Q9H427 330 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
TROAP-213ENST00000550709 FBN1P35555 2871 aaKnown RBP11.24□□□□□ -0.61
TROAP-213ENST00000550709 TRGV10A0A0A0MS01 117 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 A0A0U1RQK1 487 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 TRDV1A0A1B0GX56 115 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 ODAMA1E959 279 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 FUOMA2VDF0 154 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 TNFAIP8O95379 198 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 MPIG6BO95866 241 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 MGMTP16455 207 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 HTR2CP28335 458 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 ERP29P30040 261 aaKnown RBP11.24□□□□□ -0.61
TROAP-213ENST00000550709 BPIFB3P59826 476 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 HILS1P60008 231 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 BAMBIQ13145 260 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 NHLRC3Q5JS37 347 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 C1orf100Q5SVJ3 147 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 USP43Q70EL4 1123 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 DPCDQ9BVM2 203 aaPredicted RBP11.24□□□□□ -0.61
TROAP-213ENST00000550709 HEXA-AS1Q9H8Q6 139 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 FAM96BQ9Y3D0 163 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms