RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PPP1R36Q96LQ0 422 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 GNRHR2Q96P88 292 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 PRRG4Q9BZD6 226 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SMDT1Q9H4I9 107 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 GCM1Q9NP62 436 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM100Q9NV29 134 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 C17orf100A8MU93 164 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ST8SIA3O43173 380 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TGFAP01135 160 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ACKR3P25106 362 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 AZGP1P25311 298 aaKnown RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PCP4P48539 62 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PLP1P60201 277 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ADAM8P78325 824 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 RUNX1Q01196 453 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IFITM3Q01628 133 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ID2Q02363 134 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 CFHR3Q02985 330 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 C10orf91Q5T1B1 145 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 AADACL3Q5VUY0 350 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 WDR82Q6UXN9 313 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 SLC38A6Q8IZM9 456 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 OR2AJ1Q8NGZ0 328 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 OR56B4Q8NH76 319 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 FGFBP3Q8TAT2 258 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 MITD1Q8WV92 249 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TMIGD2Q96BF3 282 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 FXYD6Q9H0Q3 95 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TECRQ9NZ01 308 aaKnown RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 DNAJC27Q9NZQ0 273 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 DHDHQ9UQ10 334 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TRAV8-7A0A075B6U6 113 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ARGFXA6NJG6 315 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 H0Y980 276 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM178BH3BS89 294 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 CCSO14618 274 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 GIPP09681 153 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IL32P24001 234 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 NAA10P41227 235 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ART1P52961 327 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TAS2R20P59543 309 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PPP1CBP62140 327 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 CEACAM16Q2WEN9 425 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PABPC1L2AQ5JQF8 200 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 AGAP6Q5VW22 663 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM108Q6UXF1 575 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 P4HA3Q7Z4N8 544 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 GPAT4Q86UL3 456 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 MDP1Q86V88 176 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IQCF1Q8N6M8 205 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 OR13G1Q8NGZ3 307 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 NDNFQ8TB73 568 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 RND1Q92730 232 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 SUCNR1Q9BXA5 334 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 OR11A1Q9GZK7 315 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 CST11Q9H112 138 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 UQCC1Q9NVA1 299 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 STRAPQ9Y3F4 350 aaKnown RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IGKV1-12A0A0C4DH73 117 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 C5orf51A6NDU8 294 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PRRG2O14669 202 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 GPANK1O95872 356 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IGKV1D-12P01611 117 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 IGLV1-47P01700 117 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 GAPDHP04406 335 aaKnown RBP4.05□□□□□ -1.76
SCAF11-212ENST00000549162 H2BFMP0C1H6 154 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PAX6P26367 422 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 C6orf183Q5T699 404 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 AHSA2Q719I0 299 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ODF3L1Q8IXM7 274 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 DNAJA3Q96EY1 480 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 GAFA1Q96PS6 74 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF251Q9BRH9 671 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 METTL9Q9H1A3 318 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 NOX4Q9NPH5 578 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 LAMP3Q9UQV4 416 aa4.05□□□□□ -1.76
SCAF11-212ENST00000549162 PRRC2AP48634 2157 aaKnown RBP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 RFPL4AA6NLU0 287 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 RFPL4AL1F8VTS6 287 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 SCO2O43819 266 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 PLAUP00749 431 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 RBP2P50120 134 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 POLR2GP62487 172 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 LAPTM4AQ15012 233 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 CXorf66Q5JRM2 361 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM236Q5W0B7 351 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 SLC25A48Q6ZT89 311 aaKnown RBP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 ADAD2Q8NCV1 583 aaKnown RBP4.04□□□□□ -1.76
SCAF11-212ENST00000549162 PTH2Q96A98 100 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 FAM3DQ96BQ1 224 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF414Q96IQ9 312 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 PLEKHA8Q96JA3 519 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 PRRT1Q99946 306 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 AIFM2Q9BRQ8 373 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 AGMATQ9BSE5 352 aa4.04□□□□□ -1.76
SCAF11-212ENST00000549162 SIRPDQ9H106 197 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms