RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LIN7BQ9HAP6 207 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 NEK6Q9HC98 313 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 PCDHGB5Q9Y5G0 923 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 FUOMA2VDF0 154 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 SLC33A1O00400 549 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 DBTP11182 482 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 CD24P25063 80 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 PTGFRP43088 359 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 GALEQ14376 348 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 ATXN7L3Q14CW9 347 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 CDK5R1Q15078 307 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 HLA-DRB5Q30154 266 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 UTF1Q5T230 341 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 REC114Q7Z4M0 266 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 SYS1Q8N2H4 156 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 CBR4Q8N4T8 237 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 CHST4Q8NCG5 386 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 ZNF649Q9BS31 505 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 PPIL3Q9H2H8 161 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 ISG20L2Q9H9L3 353 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 MYRFQ9Y2G1 1151 aa13.91□□□□□ -0.18
CHMP1A-205ENST00000548650 A0A087X0M5 115 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 A0A1B0GX30 115 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 SNTNA6NMZ2 147 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 SULT1B1O43704 296 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 ZFPL1O95159 310 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 CD83Q01151 205 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 KRBOX4Q5JUW0 171 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 LHFPL3Q86UP9 236 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 PARP16Q8N5Y8 322 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 SLC25A33Q9BSK2 321 aa13.9□□□□□ -0.18
CHMP1A-205ENST00000548650 TMEM212A6NML5 194 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 LEUTXA8MZ59 168 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 E9PI62 339 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 OR2F2O95006 317 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 ALX3O95076 343 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 HCKP08631 526 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 BRS3P32247 399 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 SCN1BQ07699 218 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 KISS1Q15726 138 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 C17orf58Q2M2W7 97 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 TCTEX1D4Q5JR98 221 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 TPTE2P1Q5T6R2 138 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 ZFP1Q6P2D0 407 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 MRPL48Q96GC5 212 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 AKR1E2Q96JD6 320 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 ERVK13-1Q9NX77 482 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 ING3Q9NXR8 418 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 GMPPBQ9Y5P6 360 aa13.89□□□□□ -0.19
CHMP1A-205ENST00000548650 A0A1W2PRX2 142 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 ZNF729A6NN14 1252 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 LY6LH3BQJ8 138 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 BUB1B-PAK6H3BSN5 160 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 EBAG9O00559 213 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 PIN1P1O15428 100 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 AMY1AP04745 511 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 AMY2AP04746 511 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 TMEM225BP0DP42 221 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 MTNR1BP49286 362 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 ARHGDIBP52566 201 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 ZNF691Q5VV52 312 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 OR5AU1Q8NGC0 362 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 OR4D6Q8NGJ1 314 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 RGP1Q92546 391 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 KIRREL1Q96J84 757 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 PDCD1LG2Q9BQ51 273 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 INPP5EQ9NRR6 644 aa13.88□□□□□ -0.19
CHMP1A-205ENST00000548650 HSPB6O14558 160 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 DEGS1O15121 323 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 CEACAM3P40198 252 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 GLP1RP43220 463 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 RAB40BQ12829 278 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 ABCA11PQ4W5N1 156 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 ELP2Q6IA86 826 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 ZNF529Q6P280 563 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 SERPINA12Q8IW75 414 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 OR51A2Q8NGJ7 313 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 OR51T1Q8NGJ9 327 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 OR5D14Q8NGL3 314 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 OR5AK2Q8NH90 309 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 RHOXF1Q8NHV9 184 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 CREB3L1Q96BA8 519 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 MYCBPQ99417 103 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 AMBNQ9NP70 447 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 NECAP2Q9NVZ3 263 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 OR6C3Q9NZP0 311 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 DHDHQ9UQ10 334 aa13.87□□□□□ -0.19
CHMP1A-205ENST00000548650 TRAV24A0A0B4J272 114 aa13.86□□□□□ -0.19
CHMP1A-205ENST00000548650 KBTBD11-OT1A0A1B0GTJ5 212 aa13.86□□□□□ -0.19
CHMP1A-205ENST00000548650 SH2D7A6NKC9 451 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-205ENST00000548650 H0YJX3 145 aa13.86□□□□□ -0.19
CHMP1A-205ENST00000548650 H3BUI4 141 aa13.86□□□□□ -0.19
CHMP1A-205ENST00000548650 GABRPO00591 440 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms