RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 WDR5BQ86VZ2 330 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 OR2AE1Q8NHA4 323 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 OR6C1Q96RD1 312 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 PARPBPQ9NWS1 579 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 GAR1Q9NY12 217 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 ZNF581Q9P0T4 197 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 RARRES3Q9UL19 164 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SLC7A11Q9UPY5 501 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 RANBP2P49792 3224 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 CABIN1Q9Y6J0 2220 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TNRC6AQ8NDV7 1962 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 ELOA3CA0A087WX78 387 aaPredicted RBP7.56□□□□□ -1.2
TDP1-204ENST00000545686 TRAV1-1A0A0B4J248 108 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 SEC14L6B5MCN3 397 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 RPL36A-HNRNPH2H7BZ11 118 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 LIFP15018 202 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 CD81P60033 236 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 CCL20P78556 96 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 FOXO1Q12778 655 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ICAM4Q14773 271 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 KHDC3LQ587J8 217 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 OR2B11Q5JQS5 317 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 PRAMEF20Q5VT98 475 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZNF429Q86V71 674 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZNF695Q8IW36 515 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZIC4Q8N9L1 334 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZFP62Q8NB50 900 aaPredicted RBP7.56□□□□□ -1.2
TDP1-204ENST00000545686 AKR7LQ8NHP1 331 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 DYRK2Q92630 601 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 IL22RA2Q969J5 263 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 NIPSNAP3BQ9BS92 247 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
TDP1-204ENST00000545686 hCG_38984A0A1B0GV85 526 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 GJE1A6NN92 205 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZNF205O95201 554 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 LCATP04180 440 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 GLIPR1P48060 266 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 DLK1P80370 383 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 AKR1C8PQ5T2L2 129 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 Q6ZPA2 131 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 SELENOHQ8IZQ5 122 aaKnown RBP7.56□□□□□ -1.2
TDP1-204ENST00000545686 Q8NFD4 153 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 Q8WTZ3 238 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 TMEM171Q8WVE6 324 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 SLAMF9Q96A28 289 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 ZNF700Q9H0M5 742 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 TMEM38BQ9NVV0 291 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 DOK5Q9P104 306 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 UBE2J1Q9Y385 318 aaPredicted RBP7.56□□□□□ -1.2
TDP1-204ENST00000545686 LIPGQ9Y5X9 500 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
TDP1-204ENST00000545686 LOC102723996A0A087X1L8 192 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 A0A1B0GV50 99 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 IFITM10A6NMD0 228 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 CDRT15L2A8MXV6 281 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 SSSCA1O60232 199 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 YIF1AO95070 293 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 SRFP11831 508 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 VDAC1P21796 283 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 UCP1P25874 307 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ITGA3P26006 1051 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 GNRHRP30968 328 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ID3Q02535 119 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 IL24Q13007 206 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ZNF674Q2M3X9 581 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 RAET1LQ5VY80 246 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ZNF774Q6NX45 483 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 TBC1D26Q86UD7 250 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 CLDND2Q8NHS1 167 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 CPT1CQ8TCG5 803 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 UCN2Q96RP3 112 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ATP5SQ99766 215 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 BCL2L14Q9BZR8 327 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ZNF442Q9H7R0 627 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 WDR54Q9H977 334 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 GLRX2Q9NS18 164 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 IGHV3-15A0A0B4J1V0 119 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ZNF816-ZNF321PA0A0X1KG74 233 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 MED19A0JLT2 244 aaPredicted RBP7.55□□□□□ -1.2
TDP1-204ENST00000545686 FAM221AA4D161 298 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 PROB1E7EW31 1015 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 DFFBO76075 338 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 TK1P04183 234 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 GLI4P10075 376 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 MYF5P13349 255 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 DYNLT3P51808 116 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 RAC1P63000 192 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
TDP1-204ENST00000545686 PCOLCEQ15113 449 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
TDP1-204ENST00000545686 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
TDP1-204ENST00000545686 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms