RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CDK2AP1O14519 115 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 CDIPTO14735 213 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 XRCC3O43542 346 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 SIX6O95475 246 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 KRASP01116 189 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 COX6A1P12074 109 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 FCN2Q15485 313 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 CDCP2Q5VXM1 449 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ASCL5Q7RTU5 278 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 CCDC190Q86UF4 302 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 MDP1Q86V88 176 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM219AQ8IW50 185 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ARRDC1Q8N5I2 433 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 OR8B12Q8NGG6 310 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2T6Q8NHC8 308 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 MRGPRDQ8TDS7 321 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 WNT2BQ93097 391 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 SCARF2Q96GP6 870 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF75AQ96N20 296 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF385AQ96PM9 386 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 GPA33Q99795 319 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 RHNO1Q9BSD3 238 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 THYN1Q9P016 225 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 RHBDL1O75783 438 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 CYB5R3P00387 301 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PSMB3P49720 205 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 AESQ08117 197 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 IGFBP7Q16270 282 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM65Q6PI78 240 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SPSB2Q99619 263 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PIGMQ9H3S5 423 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SLA2Q9H6Q3 261 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 RANGRFQ9HD47 186 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 IL36GQ9NZH8 169 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PLEKHB1Q9UF11 243 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SSSCA1O60232 199 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF205O95201 554 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4A8P0C604 315 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 MGST1P10620 155 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 IAPPP10997 89 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 RAG2P55895 527 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SSBP1Q04837 148 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 MPPED2Q15777 294 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 C1orf174Q8IYL3 243 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC38A6Q8IZM9 456 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 FDCSPQ8NFU4 85 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SPSB4Q96A44 273 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 CABLES2Q9BTV7 478 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PTDSS2Q9BVG9 487 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 TUBG2Q9NRH3 451 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 C1RLQ9NZP8 487 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 MARCH11A6NNE9 402 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 FCGR3BO75015 233 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ACSM4P0C7M7 580 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 OR3A1P47881 315 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 EVX1P49640 407 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 TUSC1Q2TAM9 212 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC25A35Q3KQZ1 300 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ADAM5Q6NVV9 412 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ALKAL2Q6UX46 152 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 DGAT2L6Q6ZPD8 337 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 LINC00299Q6ZSB3 139 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4S1Q8NGB4 309 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PLPP2O43688 288 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 BGLAPP02818 100 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 IL5P05113 134 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 HOXA6P31267 233 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PPT1P50897 306 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 GGTLC2Q14390 218 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 C15orf54Q8N8G6 183 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4D10Q8NGI6 311 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2G3Q8NGZ4 309 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ERGIC1Q969X5 290 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ARHGAP5-AS1Q96IT6 56 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF665Q9H7R5 613 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 PARD6AQ9NPB6 346 aa6.06□□□□□ -1.44
SRGAP1-206ENST00000543397 IGHV3-43A0A0B4J1X8 118 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OR7C2O60412 319 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CD1AP06126 327 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 IGHV3-43DP0DP04 118 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CALCRP30988 508 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CTAG1AP78358 180 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OPCMLQ14982 345 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 Q56UQ5 140 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 FAAP20Q6NZ36 180 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OR8D4Q8NGM9 314 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 ACY3Q96HD9 319 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TRAF4Q9BUZ4 470 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 FBXL17Q9UF56 701 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 J3QT63 122 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TSPAN2O60636 221 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 HIST1H1DP16402 221 aaKnown RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CCL8P80075 99 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms