RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ASCL1P50553 236 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 FUT6P51993 359 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 CEACAM16Q2WEN9 425 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 RIPPLY2Q5TAB7 128 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 LGI3Q8N145 548 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 CLEC18CQ8NCF0 446 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM222Q9H0R3 208 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 IGKV1D-13A0A0B4J2D9 117 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF724A8MTY0 619 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 MPPED1O15442 326 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 ZNHIT1O43257 154 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 CXCL13O43927 109 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 TSPAN15O95858 294 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 IGKV1-13P0DP09 117 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 GFRA1P56159 465 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 NMSQ5H8A3 153 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 PPP1R32Q7Z5V6 425 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 BATF2Q8N1L9 274 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 NAXEQ8NCW5 288 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF286AQ9HBT8 521 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 SPACA1Q9HBV2 294 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 KCNIP3Q9Y2W7 256 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 TRIOBPQ9H2D6 2365 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 PROB1E7EW31 1015 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 PHF1O43189 567 aaPredicted RBP8.19□□□□□ -1.1
CNOT4-212ENST00000541284 TUSC2O75896 110 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 HMGN3Q15651 99 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 FBXW12Q6X9E4 464 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 SELENOHQ8IZQ5 122 aaKnown RBP8.19□□□□□ -1.1
CNOT4-212ENST00000541284 OR10D3Q8NH80 312 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 MALSU1Q96EH3 234 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 GPHA2Q96T91 129 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 IFT22Q9H7X7 185 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF391Q9UJN7 358 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 TMED3Q9Y3Q3 217 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
CNOT4-212ENST00000541284 C3orf85A0A1B0GTC6 90 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ST8SIA3O43173 380 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 TCN2P20062 427 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RND3P61587 244 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF611Q8N823 705 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 MR1Q95460 341 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF845Q96IR2 970 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RARRES2Q99969 163 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RGCCQ9H4X1 137 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 SLC7A10Q9NS82 523 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF816-ZNF321PA0A0X1KG74 233 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 A0A1W2PNU3 283 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 FAM24AA6NFZ4 105 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RPL36A-HNRNPH2H7BZ11 118 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 CYTIPO60759 359 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 FUT3P21217 361 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 CARD18P57730 90 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 FOXO1Q12778 655 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RNPS1Q15287 305 aaKnown RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 SRSF7Q16629 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ABCA11PQ4W5N1 156 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF818PQ6ZRF7 136 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 AAED1Q7RTV5 226 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 HSD17B11Q8NBQ5 300 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 MAFAQ8NHW3 353 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ABHD3Q8WU67 409 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 NAT6Q93015 286 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 Q9N2K0 584 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 RPS10P5Q9NQ39 176 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 STRAPQ9Y3F4 350 aaKnown RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 KIAA1324LA8MWY0 1029 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-212ENST00000541284 OR8U8P0C7N1 319 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 PAX9P55771 341 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF616Q08AN1 781 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 KCNE4Q8WWG9 221 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 C20orf24Q9BUV8 137 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 LUZP4Q9P127 313 aa8.18□□□□□ -1.1
CNOT4-212ENST00000541284 DOCK10Q96BY6 2186 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 hCG_1809904A0A1W2PP81 198 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 A0A1W2PR64 198 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 A0A1W2PRV1 198 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 PPIHO43447 177 aaKnown RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 PITX3O75364 302 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 CDS2O95674 445 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 BCL3P20749 454 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 RAB5CP51148 216 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 FOXG1P55316 489 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 RPS18P62269 152 aaKnown RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 POLR2GP62487 172 aaKnown RBP eCLIP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 HAGHQ16775 308 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 CXorf66Q5JRM2 361 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 WIPI1Q5MNZ9 446 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 PLCXD3Q63HM9 321 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-212ENST00000541284 SLC25A26Q70HW3 274 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 OR2V1Q8NHB1 315 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 HIPK2Q9H2X6 1198 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 RNF115Q9Y4L5 304 aa8.17□□□□□ -1.1
CNOT4-212ENST00000541284 ARHGAP21Q5T5U3 1957 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms