RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 MFNGO00587 321 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 CGAP01215 116 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 IGLV1-44P01699 117 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 CRYAAP02489 173 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 RLN1P04808 185 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 CTXN2P0C2S0 81 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 AMY2BP19961 511 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 SERPINA2P20848 420 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 FUT3P21217 361 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 BTCP35070 178 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 IDH3GP51553 393 aaPredicted RBP7.1□□□□□ -1.27
CHD4-208ENST00000540960 FGF12P61328 243 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
CHD4-208ENST00000540960 IL24Q13007 206 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 MPPED2Q15777 294 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 KCNJ8Q15842 424 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 LPCAT3Q6P1A2 487 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
CHD4-208ENST00000540960 PEG10Q86TG7 708 aaKnown RBP7.1□□□□□ -1.27
CHD4-208ENST00000540960 HOGA1Q86XE5 327 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 BPIFB2Q8N4F0 458 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 SPICQ8N5J4 248 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 ZNF610Q8N9Z0 462 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 OR4C16Q8NGL9 310 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 OR6F1Q8NGZ6 308 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 NPRL2Q8WTW4 380 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 RADILQ96JH8 1075 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 RNF170Q96K19 258 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 HYLS1Q96M11 299 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 VRK1Q99986 396 aaPredicted RBP7.1□□□□□ -1.27
CHD4-208ENST00000540960 GHITMQ9H3K2 345 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 TMEM100Q9NV29 134 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 A0A0A6YYJ9 748 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 KIR2DS1A0A191URI9 304 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 TMEM82A0PJX8 343 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ZNF732B4DXR9 585 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 J3QT63 122 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 PDCD6O75340 191 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 LYZL6O75951 148 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 CD3DP04234 171 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 SOD3P08294 240 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 GNB3P16520 340 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 KITLGP21583 273 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 MDH2P40926 338 aaKnown RBP7.09□□□□□ -1.27
CHD4-208ENST00000540960 KIR2DS4P43632 304 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 CCR6P51684 374 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 GMFBP60983 142 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 TSPAN5P62079 268 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 HGFACQ04756 655 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 KIR2DS1Q14954 304 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 MBNL2Q5VZF2 373 aaKnown RBP7.09□□□□□ -1.27
CHD4-208ENST00000540960 SEZ6L2Q6UXD5 910 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 IDO2Q6ZQW0 420 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ZNF611Q8N823 705 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 TMEM104Q8NE00 496 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 OR51S1Q8NGJ8 323 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 OR1J1Q8NGS3 322 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 OR13G1Q8NGZ3 307 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 TERB2Q8NHR7 220 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ZFAND1Q8TCF1 268 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 GIMAP1Q8WWP7 306 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ST8SIA4Q92187 359 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 CMBLQ96DG6 245 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ZNF75AQ96N20 296 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 SPACA5Q96QH8 159 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 PECRQ9BY49 303 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 BANF2Q9H503 90 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 IFT22Q9H7X7 185 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 C12orf4Q9NQ89 552 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 SLC23A1Q9UHI7 598 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 KCNS2Q9ULS6 477 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 ST3GAL6Q9Y274 331 aa7.09□□□□□ -1.27
CHD4-208ENST00000540960 FOXI3A8MTJ6 420 aaPredicted RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 A8MXE2 369 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 MCRIP1C9JLW8 97 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 C16orf97H3BN30 126 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 HS3ST1O14792 307 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 ARPC1BO15143 372 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 SSX4O60224 188 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 RGS11O94810 467 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 C1QBP02746 253 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 ZNF35P13682 527 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 ZFP36P26651 326 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 S100GP29377 79 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 WNT5AP41221 380 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 GLP1RP43220 463 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 HAAOP46952 286 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 KCNJ3P48549 501 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 RBM11P57052 281 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 ARPC4P59998 168 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 RAP2BP61225 183 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 SEC61A1P61619 476 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 FGL1Q08830 312 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 CBX3Q13185 183 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 OR8G1Q15617 311 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 C4orf46Q504U0 113 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 VWA1Q6PCB0 445 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms