RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF251Q9BRH9 671 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 ADAT1Q9BUB4 502 aaKnown RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 MS4A7Q9GZW8 240 aaPredicted RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 OR51I2Q9H344 312 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 GPN1Q9HCN4 374 aaPredicted RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 TMEM100Q9NV29 134 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 ANAPC10Q9UM13 185 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 PRR14LQ5THK1 2151 aa14.4□□□□□ -0.11
COPS3-212ENST00000539941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 MEIS3P1A6NDR6 274 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 G3V3Q6 166 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 TRAPPC2LH3BP13 241 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 J3QT63 122 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 CD74P04233 296 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 TBPP20226 339 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 GABRR1P24046 479 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 ASCL1P50553 236 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 RBM11P57052 281 aaKnown RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 NKX6-1P78426 367 aaPredicted RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 STEAP1BQ6NZ63 245 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 FBXL14Q8N1E6 418 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 NUDCD2Q8WVJ2 157 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 SEC22CQ9BRL7 303 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 TCEAL7Q9BRU2 100 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 NKIRAS2Q9NYR9 191 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 OSGIN2Q9Y236 505 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 ST3GAL6Q9Y274 331 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 HEATR1Q9H583 2144 aaKnown RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 A0A1B0GWJ7 208 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 ZNF736B4DX44 427 aaPredicted RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 NUPL2O15504 423 aaKnown RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 TIMM8AO60220 97 aaPredicted RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 PTAFRP25105 342 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 CCR6P51684 374 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 FGF12P61328 243 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 MEF2DQ14814 521 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 OR8G1Q15617 311 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 TAF9Q16594 264 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 ALKBH6Q3KRA9 238 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 HAGHLQ6PII5 290 aaPredicted RBP14.39□□□□□ -0.11
COPS3-212ENST00000539941 TMEM108Q6UXF1 575 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 C17orf107Q6ZR85 190 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 COQ8AQ8NI60 647 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 OCSTAMPQ9BR26 566 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 PLK3Q9H4B4 646 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 PLEKHJ1Q9NW61 149 aa14.39□□□□□ -0.11
COPS3-212ENST00000539941 CCL21O00585 134 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 CD3DP04234 171 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 FABP1P07148 127 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 BCL3P20749 454 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 CD40P25942 277 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 CHATP28329 748 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 CHRNB4P30926 498 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 PMELP40967 661 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 ARFRP1Q13795 201 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 SWI5Q1ZZU3 235 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 HFEQ30201 348 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 FBXL19-AS1Q494R0 122 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 SFRP4Q6FHJ7 346 aaPredicted RBP14.38□□□□□ -0.11
COPS3-212ENST00000539941 ALKBH2Q6NS38 261 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 LINC00596Q86U02 117 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 SLAMF9Q96A28 289 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 NPDC1Q9NQX5 325 aaPredicted RBP14.38□□□□□ -0.11
COPS3-212ENST00000539941 MTCH1Q9NZJ7 389 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 POLDIP2Q9Y2S7 368 aa14.38□□□□□ -0.11
COPS3-212ENST00000539941 SNRPGP15A8MWD9 76 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 GEMIN2O14893 280 aaKnown RBP14.37□□□□□ -0.11
COPS3-212ENST00000539941 OR2A4O95047 310 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 RAB3DO95716 219 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 CXCL2P19875 107 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 NPBWR2P48146 333 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 FABP6P51161 128 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 GMFBP60983 142 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 MZT1Q08AG7 82 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 Q8IYB0 196 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 OR13G1Q8NGZ3 307 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 OR1S1Q8NH92 325 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 OR2A7Q96R45 310 aa14.37□□□□□ -0.11
COPS3-212ENST00000539941 WRBO00258 174 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 SYNGR1O43759 233 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 PDCD6O75340 191 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 NDUFB6O95139 128 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 IGHV3-13P01766 116 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 IL5P05113 134 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 ACAA1P09110 424 aaPredicted RBP14.36□□□□□ -0.11
COPS3-212ENST00000539941 S100PP25815 95 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 RBMS2Q15434 407 aaKnown RBP14.36□□□□□ -0.11
COPS3-212ENST00000539941 MPV17LQ2QL34 196 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 PIGYQ3MUY2 71 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 ACTBL2Q562R1 376 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 C22orf34Q6ZV56 151 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 RTN4RL2Q86UN3 420 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 NUP37Q8NFH4 326 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 C20orf85Q9H1P6 137 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 CXXC4Q9H2H0 198 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 NGBQ9NPG2 151 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 PLEKHA6Q9Y2H5 1048 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 FCER2P06734 321 aa14.36□□□□□ -0.11
COPS3-212ENST00000539941 SEC61A1P61619 476 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms