RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 FAM189A2Q15884 450 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 C2orf76Q3KRA6 126 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM76BQ5HYJ3 339 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 OR2W3Q7Z3T1 314 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 OR10Z1Q8NGY1 313 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 KCNG3Q8TAE7 436 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM46BQ96A09 425 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 URM1Q9BTM9 101 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 BARHL1Q9BZE3 327 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 TLNRD1Q9H1K6 362 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 GCM1Q9NP62 436 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 ADAM30Q9UKF2 790 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 ETV7Q9Y603 341 aa10.33□□□□□ -0.76
CLSTN3-208ENST00000538933 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM25AB3EWG3 89 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM25CB3EWG5 89 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM25GB3EWG6 89 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SRRM5B3KS81 715 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PTBP3O95758 552 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 CYB5R3P00387 301 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PAHP00439 452 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PPIAL4GP0DN37 164 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 GTF2F2P13984 249 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PRKACAP17612 351 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PAX2Q02962 417 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SMIM21Q3B7S5 101 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SPRNQ5BIV9 151 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 VAX1Q5SQQ9 334 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 REC114Q7Z4M0 266 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SAMD12Q8N8I0 201 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 POC1AQ8NBT0 407 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 Q8TCH9 128 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 ZNF488Q96MN9 340 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 TMEM59Q9BXS4 323 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 BANF2Q9H503 90 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 TMEM106BQ9NUM4 274 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 PTTG2Q9NZH5 202 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 RAB22AQ9UL26 194 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 SPATA2Q9UM82 520 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 NPTNQ9Y639 398 aa10.32□□□□□ -0.76
CLSTN3-208ENST00000538933 IGKV1-12A0A0C4DH73 117 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 TMEM272A0A1B0GTI8 110 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 METTL21EPA6NDL7 271 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 IGKV1D-12P01611 117 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 PGA5P0DJD9 388 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 MGMTP16455 207 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 SCAND1P57086 179 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 DEFB112Q30KQ8 113 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 LYPD6Q86Y78 171 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 C11orf53Q8IXP5 236 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 OR51T1Q8NGJ9 327 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 LINC01006Q8NI28 216 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 CHIAQ9BZP6 476 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 SELENOIQ9C0D9 397 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 SLIRPQ9GZT3 109 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 ATG5Q9H1Y0 275 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 KCNK15Q9H427 330 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 RBFOX1Q9NWB1 397 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 IL36GQ9NZH8 169 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 MTCH1Q9NZJ7 389 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 OR5V1Q9UGF6 321 aa10.31□□□□□ -0.76
CLSTN3-208ENST00000538933 DYNC2H1Q8NCM8 4307 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 TET2Q6N021 2002 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 A0A075B6Q4 140 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 ISPDA4D126 451 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 A8MXK9 166 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 IGHV2-70P01814 119 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 SFTPBP07988 381 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 CD37P11049 281 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 CPT2P23786 658 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 GABRR1P24046 479 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 TALDO1P37837 337 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 NPBWR2P48146 333 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 FGF12P61328 243 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 UBE2NLQ5JXB2 153 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 CRIP3Q6Q6R5 217 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 ASCL4Q6XD76 172 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 OR5H6Q8NGV6 325 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 DACT3Q96B18 629 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 MRPS24Q96EL2 167 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 PATZ1Q9HBE1 687 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 RHBDL2Q9NX52 303 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 DCAF16Q9NXF7 216 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 RASL12Q9NYN1 266 aa10.3□□□□□ -0.76
CLSTN3-208ENST00000538933 OR14J1Q9UGF5 321 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms