RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 USB1Q9BQ65 265 aaKnown RBP12.32□□□□□ -0.44
USP44-203ENST00000537435 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
USP44-203ENST00000537435 FGF23Q9GZV9 251 aaPredicted RBP12.32□□□□□ -0.44
USP44-203ENST00000537435 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 RPS10P5Q9NQ39 176 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 PQLC2LA1A4F0 135 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 SERPINA7P05543 415 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 HAAOP46952 286 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 PRDX4Q13162 271 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 SSPNQ14714 243 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 Q8NFD4 153 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 C14orf79Q96F83 325 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 BOD1Q96IK1 185 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 CLCC1Q96S66 551 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 TMEM222Q9H0R3 208 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 UBE2J1Q9Y385 318 aaPredicted RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 FRYLO94915 3013 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 TRIOBPQ9H2D6 2365 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 FAM24AA6NFZ4 105 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 CDS2O95674 445 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 RAB5CP51148 216 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 NRN1LQ496H8 165 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 C6orf15Q6UXA7 325 aaPredicted RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 TMEM182Q6ZP80 229 aaPredicted RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 FAM185AQ8N0U4 392 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 SUMF1Q8NBK3 374 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 PSMF1Q92530 271 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 Q9N2K0 584 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
USP44-203ENST00000537435 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
USP44-203ENST00000537435 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 HLA-HP01893 362 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 SCTP09683 121 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 NKX2-1P43699 371 aaPredicted RBP12.3□□□□□ -0.44
USP44-203ENST00000537435 GPM6AP51674 278 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP44-203ENST00000537435 SRPXP78539 464 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 ZNF695Q8IW36 515 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 SPACA1Q9HBV2 294 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 BOKQ9UMX3 212 aaPredicted RBP12.3□□□□□ -0.44
USP44-203ENST00000537435 LOXL2Q9Y4K0 774 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 HSPB6O14558 160 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 LAMTOR5O43504 91 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 TK1P04183 234 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 SNRNP70P08621 437 aaKnown RBP12.3□□□□□ -0.44
USP44-203ENST00000537435 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
USP44-203ENST00000537435 FGF12P61328 243 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 Q6ZS49 121 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 C11orf1Q9H5F2 150 aa12.3□□□□□ -0.44
USP44-203ENST00000537435 IGKV3D-15A0A087WSY6 115 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 A0A1B0GV50 99 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 FOLR2P14207 255 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 PAX6P26367 422 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 CLINT1Q14677 625 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 MRPL21Q7Z2W9 205 aaKnown RBP12.29□□□□□ -0.44
USP44-203ENST00000537435 TUSC5Q8IXB3 177 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 ZDHHC23Q8IYP9 409 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 SELENOHQ8IZQ5 122 aaKnown RBP12.29□□□□□ -0.44
USP44-203ENST00000537435 THOC3Q96J01 351 aaKnown RBP12.29□□□□□ -0.44
USP44-203ENST00000537435 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 PRRG4Q9BZD6 226 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 LINC00470Q9BZP3 86 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 CALHM2Q9HA72 323 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 FBXO7Q9Y3I1 522 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms