RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SRSF7Q16629 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTSB-228ENST00000533455 TRIM61Q5EBN2 209 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 SELENOHQ8IZQ5 122 aaKnown RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 TMEM171Q8WVE6 324 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 IMMP1LQ96LU5 166 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 PAPOLGQ9BWT3 736 aaKnown RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 ZNF576Q9H609 170 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 ZNF442Q9H7R0 627 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 U3KQA8 63 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 H3BQ15 152 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 RPL36A-HNRNPH2H7BZ11 118 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 HSD17B6O14756 317 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 GNRHRP30968 328 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 RAC3P60763 192 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 ZNF506Q5JVG8 444 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 ACER2Q5QJU3 275 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 PLCXD3Q63HM9 321 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 TBC1D26Q86UD7 250 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 ZFP62Q8NB50 900 aaPredicted RBP14.33□□□□□ -0.12
CTSB-228ENST00000533455 Q8NFD4 153 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 MR1Q95460 341 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 GNPNAT1Q96EK6 184 aaPredicted RBP14.33□□□□□ -0.12
CTSB-228ENST00000533455 ABHD14AQ9BUJ0 271 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 ZNF700Q9H0M5 742 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 CRLF2Q9HC73 371 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 UBE2J1Q9Y385 318 aaPredicted RBP14.33□□□□□ -0.12
CTSB-228ENST00000533455 RFNGQ9Y644 331 aa14.33□□□□□ -0.12
CTSB-228ENST00000533455 TNRC6BQ9UPQ9 1833 aaKnown RBP14.33□□□□□ -0.12
CTSB-228ENST00000533455 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 ZNF816-ZNF321PA0A0X1KG74 233 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 FBP1P09467 338 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 CEACAM1P13688 526 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 SSR4P51571 173 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 PSG4Q00888 419 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 ZNF92Q03936 586 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 BAXQ07812 192 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 IGSF11Q5DX21 431 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 ZNF695Q8IW36 515 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 ODF3L1Q8IXM7 274 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 EDARADDQ8WWZ3 215 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 RAB39BQ96DA2 213 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 OR2H1Q9GZK4 316 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 WNT5BQ9H1J7 359 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 GLRX2Q9NS18 164 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 MRPS17Q9Y2R5 130 aaKnown RBP14.32□□□□□ -0.12
CTSB-228ENST00000533455 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 SSSCA1O60232 199 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 HSPB1P04792 205 aaKnown RBP14.32□□□□□ -0.12
CTSB-228ENST00000533455 COX6A1P12074 109 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 VAMP2P63027 116 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 KIAA0141Q14154 515 aaPredicted RBP14.32□□□□□ -0.12
CTSB-228ENST00000533455 ICAM4Q14773 271 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 NCMAPQ5T1S8 102 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 WDR5BQ86VZ2 330 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 NAXEQ8NCW5 288 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 M1APQ8TC57 530 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 DUSP23Q9BVJ7 150 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 SLC7A10Q9NS82 523 aa14.32□□□□□ -0.12
CTSB-228ENST00000533455 ZNF716A6NP11 495 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 CBR3O75828 277 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 SCAF4O95104 1147 aaKnown RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 B4GALT1P15291 398 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 EPHA8P29322 1005 aaPredicted RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 NTF4P34130 210 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 RPS10P46783 165 aaKnown RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 B3GALT5-AS1P59052 145 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 ID3Q02535 119 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 PDCD1Q15116 288 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 NMSQ5H8A3 153 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 DPPA3Q6W0C5 159 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 SUMF1Q8NBK3 374 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 OR5C1Q8NGR4 320 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 SLAMF9Q96A28 289 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 SPSB4Q96A44 273 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 JSRP1Q96MG2 331 aaPredicted RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 PHF7Q9BWX1 381 aaPredicted RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 TOLLIPQ9H0E2 274 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 G3V3Y1 287 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 ADAM20O43506 726 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 OR7C1O76099 320 aaPredicted RBP14.31□□□□□ -0.12
CTSB-228ENST00000533455 UMODP07911 640 aa14.31□□□□□ -0.12
CTSB-228ENST00000533455 FGF5P12034 268 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms